Gene DvMF_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0055 
Symbol 
ID7171929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp71779 
End bp73794 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content67% 
IMG OID643538548 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_002434484 
Protein GI218885163 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCAGT TTTCGCGCAA TCTGATTCTC TGGGCGATCA TCTCGTTGCT GATGGTCGTC 
CTGTTCAACA TGTTCAATCA GCCACAGGGG ACGCAGGCGC GTCTTACCTA TACGGAATTC
CTCCAGAAGG TCGAGCGCGG CGAGGTGCTG CGCGTGACCA TCCAGGGCCA GAAGCTGACG
GGCGAAAGCT CCGAGGGCAA GGCGTTCCAG ACCTATGCCC CGCACGACCC CGAACTGGTT
ACCCGCCTCA TTTCCCAGAA GGTCGAAGTG AAGGCGGAAC CGCAGGAAGA AGCCCCCTGG
TACATGACCC TGCTGGTTTC CTGGTTCCCC ATGCTGCTGC TGATCGGCGT GTGGATATTC
TTCATGCGCC AGATGCAGGG CGGCGGGGGC AAGGCCATGT CCTTCGGACG GTCGCGCGCC
CGCATGATCA CCCCGGAATC GGCCCGCGTC ACCTTCGAGG ACGTGGCGGG CGTGGACGAA
GCCAAGGAAG AGCTGAGCGA AGTGGTGGAG TTCCTGTCCA ACCCGCGCAA GTTCACCCGC
CTTGGCGGGC GCATCCCCAA GGGCGTGCTG CTGGTCGGCC CTCCCGGCAC CGGCAAGACC
CTTCTGGCCC GTGCCGTGGC GGGCGAGGCG GGCGTGCCGT TCTTTTCCAT TTCCGGCTCC
GACTTCGTGG AAATGTTCGT GGGCGTGGGC GCATCGCGCG TGCGCGACCT GTTCATGCAG
GGCAAGAAAA GCGCGCCCTG TCTCATCTTC ATCGATGAAA TCGACGCAGT GGGCCGTCAG
CGCGGCGCTG GCCTTGGCGG CGGGCACGAC GAGCGCGAGC AGACCCTGAA CCAGCTGCTG
GTGGAAATGG ACGGCTTCGA ATCCAACGAG GGCGTCATCC TCATCGCCGC CACCAACCGG
CCCGACGTGC TGGACCCGGC GCTGCTGCGC CCCGGTCGCT TCGACCGCCA AGTGGTGGTG
CCCACCCCCG ACGTGCGTGG CCGCAAGCGC ATCCTTGAAG TGCACACCCG CCGCACGCCC
CTGGCCACCG GCGTGGTACT GGACATCATC GCCAAGGGCA CGCCCGGCTT TTCGGGCGCG
GACCTGGAGA ACCTGGTCAA CGAGGCCGCC TTGCAGGCCG CCAAGGTGGG CAAGGACACC
GTGGACATGG GCGACTTCGA GTACGCCAAG GACAAGGTGC TCATGGGCAA GGAGCGTCGC
AGCCTCATCC TGAGCGACGA GGAAAAGCGC ATCACCGCCT ACCACGAGGC CGGCCACGCC
CTGGCCGCCA AGCTGCTGCC CGGCTCCGAC CCGGTGCACA AGGTGACCAT CATCCCGCGT
GGCCGCGCCC TGGGCGTGAC CATGCAACTG CCGGAAGGCG ACCGCCACGG CTACTCGCGT
TCGTACCTGC TGAGCAACCT TGTGTTGCTG TTGGGTGGCC GCGTGGCCGA AGAGGTGGTG
TTCAACGACA TCACCACCGG CGCGGGCAAC GACATCGAGC GTGCTACCAA GATGGCCCGC
AAGATGGTCT GCGAATGGGG CATGAGCGAG GCCATCGGCC CCATGAACAT CGGCGAGCAG
GGCGAAGAGG TTTTCATCGG GCGCGAATGG GCGCATTCCC GCAACTTCAG CGAGGAAACC
GCCCGCCTGG TGGACGCCGA GGTCAAGCGC ATCATCGAGG AGGCCCGGCA GCGCTGCCGC
ACCCTGCTCG AAGGGAACAT CGACTCGCTG CATGCCATCG CCGGTGCCCT GCTGGAGCGT
GAAACCATCA GCGGCGACGA CATCGACGTG CTGATGCGCG GCGAACAGCT GCCCCCGGAA
AAGCCCAACA ACCGTCCCGG AACCGTCCGT GCGGGGGAGC AGCCCGCGTC AGACAGAAAC
GCCGGAGCGC CCTCGGCCTC CGCCGTGCAG CCCGGCCCCG CCAGCGCGGA GTCCGACGCC
GCCGGGCGCG ACGAGTTCAC TCTGGAGTCC GACGACGCCG CCGAGCGCGG CCCCGGCGGC
AACGACGACC ACAACGGTGG CGCGGGGCGC CGATGA
 
Protein sequence
MNQFSRNLIL WAIISLLMVV LFNMFNQPQG TQARLTYTEF LQKVERGEVL RVTIQGQKLT 
GESSEGKAFQ TYAPHDPELV TRLISQKVEV KAEPQEEAPW YMTLLVSWFP MLLLIGVWIF
FMRQMQGGGG KAMSFGRSRA RMITPESARV TFEDVAGVDE AKEELSEVVE FLSNPRKFTR
LGGRIPKGVL LVGPPGTGKT LLARAVAGEA GVPFFSISGS DFVEMFVGVG ASRVRDLFMQ
GKKSAPCLIF IDEIDAVGRQ RGAGLGGGHD EREQTLNQLL VEMDGFESNE GVILIAATNR
PDVLDPALLR PGRFDRQVVV PTPDVRGRKR ILEVHTRRTP LATGVVLDII AKGTPGFSGA
DLENLVNEAA LQAAKVGKDT VDMGDFEYAK DKVLMGKERR SLILSDEEKR ITAYHEAGHA
LAAKLLPGSD PVHKVTIIPR GRALGVTMQL PEGDRHGYSR SYLLSNLVLL LGGRVAEEVV
FNDITTGAGN DIERATKMAR KMVCEWGMSE AIGPMNIGEQ GEEVFIGREW AHSRNFSEET
ARLVDAEVKR IIEEARQRCR TLLEGNIDSL HAIAGALLER ETISGDDIDV LMRGEQLPPE
KPNNRPGTVR AGEQPASDRN AGAPSASAVQ PGPASAESDA AGRDEFTLES DDAAERGPGG
NDDHNGGAGR R