Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0027 |
Symbol | |
ID | 7171899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 34593 |
End bp | 36311 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643538519 |
Product | indolepyruvate/phenylpyruvate decarboxylase |
Protein accession | YP_002434457 |
Protein GI | 218885136 |
COG category | [G] Carbohydrate transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
TIGRFAM ID | [TIGR03394] indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.173161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA CCGAAGCGCT GCTGCACGCC CTGAAGGAAC GCGGCGCGCG CGAGGTCTGG GGCATTCCCG GCGACTTCGC GCTGCCGTAT TTCAAGATCA TCGAGCAGAC CGGCATCCTG CCGCTGGTCA CCCTGACGCA TGAGCCGGGG CTGGGCTTTG CCGCCGACGC CGCCGCGCGC ATTCGCCGGG GGCTCAGCGT GGCCGCCGTC ACCTACGGGG CCGGGGCCAT CAACATGCTG AACGCCGTGG CCCAGGCCTT TGCCGAAAAG TCGCCGCTGG TGGTCGTTTC CGGCGCGCCG GGCACGGCGG AGAGGGCGCG CGGCCTTCTG CTGCACCATC AGGTGAAGAC CGTGGGCTCG CAGTTCCGCA TGTACCAGGA AGTCACCTGC GACCAGGGTA TTCTGGACGA CCCGGCCACC GCCCCCGCCA TCATCGAGCG GGTGCTGCGC AACTGCCTTG AGCATTCGCG CCCGGTGTAC CTGGAAATTC CGCGCGACAT GCCCGCCGTG GCCTGCGGCC CGGTGGCCCC GCACATGCCC ACCCCCTGCG ATGCAGAGGC CGTGGCCGCC TGCGCGGCGG AAGTGTTGGC TCGGCTGCGC GCCGCCAGCC GTCCGGTACT GATGGTGGGG GTGGAGGTGC GCCGCTACGG CCTTGAGGAC CGCGTGGCGG AACTGGCCGA CAGGCTGGGC GTGCCCGTGG TCACCAGCTT CATGGGGCGC GGGCTGCTGG CTGGCAAGGC CTGCCTGCAA GGCACCTACA TGGGCGTGGC GGGGGATGCC GCCATCACCC AGGCAGTGGA AGGCTCCGAC GGCCTGTTGC TGCTGGGGGT GATCATGTCC GACACCAACT TCGGGGTGTC TGCCAGCCAC ATCGACCGCC GCCGCCTGAT GCACGCCGAG GACCGCCAGG TGCGCATGGG CTTCCATACC TATCACGACA TCCCGCTGGA AAGTCTGGTG GATGCGCTGC TGGCAGCCCT TCCTGAAGGC GGGCAGGCCT GTGCCGTTCC GGCAGGCCTG GACGGCGATG GGGGGGCGCT GGGCCGCAAC GTGGTGTATC GGCGCGGTTT CGTGGCGGAC GACGCCCCGG TGACGCCCGA CGACATCGCC GTGCTGCTCA ACGATTTCTA CGATGGCGTG TTGAACGGAC CGGCGGTCAG CGCCGAGCCG GATCCGTTCC CGTGGCCCTT TGGCGGGCGC CCCTTGCCGT GGCCGCTGGC CTGCGACATC GGCGACTGCC TGTTCACCGC GCTGTCGGTG CGCCCCGTGC CCATGGTGGG GCCGGGGTAC TACGCCAGCA TGGGTTTTGG CGTGCCTGCG GGCATGGGCC TGCAGGTGAC CACCGGGCAG CGTTCGTTGA CACTGGTGGG CGACGGAGCC TTCCAGATGA CCGGCATGGA GCTTGGCAAC TGTGCGCGTC TCGGCATCGA CCCGGTGGTC GTGGTGTTCA ACAACGCCTC GTGGGAGATG CTGCGGGTGT TCCAGCCGGA AACCTCGTAC AGCGCCATCA ACACGCTGGA CTTCGCCGCC TTTGCCGATG CGCTGGGCGG GCACGGCTAC CGCGTGACCA CCCGGCGCGA ACTGGCGGCT GCGTTTGCCT CGGCCACCAC GGAGCGCGGG CGCTTCCAAC TCATCGACGT GCGGTTGGAA AAGGGCGCCA TTTCCGACAC ACTGGCCAAT TTCGTGGCCG GGGTGAAGCG GGTGTCCGGC GTGAAGTAG
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Protein sequence | MNITEALLHA LKERGAREVW GIPGDFALPY FKIIEQTGIL PLVTLTHEPG LGFAADAAAR IRRGLSVAAV TYGAGAINML NAVAQAFAEK SPLVVVSGAP GTAERARGLL LHHQVKTVGS QFRMYQEVTC DQGILDDPAT APAIIERVLR NCLEHSRPVY LEIPRDMPAV ACGPVAPHMP TPCDAEAVAA CAAEVLARLR AASRPVLMVG VEVRRYGLED RVAELADRLG VPVVTSFMGR GLLAGKACLQ GTYMGVAGDA AITQAVEGSD GLLLLGVIMS DTNFGVSASH IDRRRLMHAE DRQVRMGFHT YHDIPLESLV DALLAALPEG GQACAVPAGL DGDGGALGRN VVYRRGFVAD DAPVTPDDIA VLLNDFYDGV LNGPAVSAEP DPFPWPFGGR PLPWPLACDI GDCLFTALSV RPVPMVGPGY YASMGFGVPA GMGLQVTTGQ RSLTLVGDGA FQMTGMELGN CARLGIDPVV VVFNNASWEM LRVFQPETSY SAINTLDFAA FADALGGHGY RVTTRRELAA AFASATTERG RFQLIDVRLE KGAISDTLAN FVAGVKRVSG VK
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