Gene DvMF_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0027 
Symbol 
ID7171899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp34593 
End bp36311 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content69% 
IMG OID643538519 
Productindolepyruvate/phenylpyruvate decarboxylase 
Protein accessionYP_002434457 
Protein GI218885136 
COG category[G] Carbohydrate transport and metabolism
[R] General function prediction only
[H] Coenzyme transport and metabolism 
COG ID[COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes 
TIGRFAM ID[TIGR03394] indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.173161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA CCGAAGCGCT GCTGCACGCC CTGAAGGAAC GCGGCGCGCG CGAGGTCTGG 
GGCATTCCCG GCGACTTCGC GCTGCCGTAT TTCAAGATCA TCGAGCAGAC CGGCATCCTG
CCGCTGGTCA CCCTGACGCA TGAGCCGGGG CTGGGCTTTG CCGCCGACGC CGCCGCGCGC
ATTCGCCGGG GGCTCAGCGT GGCCGCCGTC ACCTACGGGG CCGGGGCCAT CAACATGCTG
AACGCCGTGG CCCAGGCCTT TGCCGAAAAG TCGCCGCTGG TGGTCGTTTC CGGCGCGCCG
GGCACGGCGG AGAGGGCGCG CGGCCTTCTG CTGCACCATC AGGTGAAGAC CGTGGGCTCG
CAGTTCCGCA TGTACCAGGA AGTCACCTGC GACCAGGGTA TTCTGGACGA CCCGGCCACC
GCCCCCGCCA TCATCGAGCG GGTGCTGCGC AACTGCCTTG AGCATTCGCG CCCGGTGTAC
CTGGAAATTC CGCGCGACAT GCCCGCCGTG GCCTGCGGCC CGGTGGCCCC GCACATGCCC
ACCCCCTGCG ATGCAGAGGC CGTGGCCGCC TGCGCGGCGG AAGTGTTGGC TCGGCTGCGC
GCCGCCAGCC GTCCGGTACT GATGGTGGGG GTGGAGGTGC GCCGCTACGG CCTTGAGGAC
CGCGTGGCGG AACTGGCCGA CAGGCTGGGC GTGCCCGTGG TCACCAGCTT CATGGGGCGC
GGGCTGCTGG CTGGCAAGGC CTGCCTGCAA GGCACCTACA TGGGCGTGGC GGGGGATGCC
GCCATCACCC AGGCAGTGGA AGGCTCCGAC GGCCTGTTGC TGCTGGGGGT GATCATGTCC
GACACCAACT TCGGGGTGTC TGCCAGCCAC ATCGACCGCC GCCGCCTGAT GCACGCCGAG
GACCGCCAGG TGCGCATGGG CTTCCATACC TATCACGACA TCCCGCTGGA AAGTCTGGTG
GATGCGCTGC TGGCAGCCCT TCCTGAAGGC GGGCAGGCCT GTGCCGTTCC GGCAGGCCTG
GACGGCGATG GGGGGGCGCT GGGCCGCAAC GTGGTGTATC GGCGCGGTTT CGTGGCGGAC
GACGCCCCGG TGACGCCCGA CGACATCGCC GTGCTGCTCA ACGATTTCTA CGATGGCGTG
TTGAACGGAC CGGCGGTCAG CGCCGAGCCG GATCCGTTCC CGTGGCCCTT TGGCGGGCGC
CCCTTGCCGT GGCCGCTGGC CTGCGACATC GGCGACTGCC TGTTCACCGC GCTGTCGGTG
CGCCCCGTGC CCATGGTGGG GCCGGGGTAC TACGCCAGCA TGGGTTTTGG CGTGCCTGCG
GGCATGGGCC TGCAGGTGAC CACCGGGCAG CGTTCGTTGA CACTGGTGGG CGACGGAGCC
TTCCAGATGA CCGGCATGGA GCTTGGCAAC TGTGCGCGTC TCGGCATCGA CCCGGTGGTC
GTGGTGTTCA ACAACGCCTC GTGGGAGATG CTGCGGGTGT TCCAGCCGGA AACCTCGTAC
AGCGCCATCA ACACGCTGGA CTTCGCCGCC TTTGCCGATG CGCTGGGCGG GCACGGCTAC
CGCGTGACCA CCCGGCGCGA ACTGGCGGCT GCGTTTGCCT CGGCCACCAC GGAGCGCGGG
CGCTTCCAAC TCATCGACGT GCGGTTGGAA AAGGGCGCCA TTTCCGACAC ACTGGCCAAT
TTCGTGGCCG GGGTGAAGCG GGTGTCCGGC GTGAAGTAG
 
Protein sequence
MNITEALLHA LKERGAREVW GIPGDFALPY FKIIEQTGIL PLVTLTHEPG LGFAADAAAR 
IRRGLSVAAV TYGAGAINML NAVAQAFAEK SPLVVVSGAP GTAERARGLL LHHQVKTVGS
QFRMYQEVTC DQGILDDPAT APAIIERVLR NCLEHSRPVY LEIPRDMPAV ACGPVAPHMP
TPCDAEAVAA CAAEVLARLR AASRPVLMVG VEVRRYGLED RVAELADRLG VPVVTSFMGR
GLLAGKACLQ GTYMGVAGDA AITQAVEGSD GLLLLGVIMS DTNFGVSASH IDRRRLMHAE
DRQVRMGFHT YHDIPLESLV DALLAALPEG GQACAVPAGL DGDGGALGRN VVYRRGFVAD
DAPVTPDDIA VLLNDFYDGV LNGPAVSAEP DPFPWPFGGR PLPWPLACDI GDCLFTALSV
RPVPMVGPGY YASMGFGVPA GMGLQVTTGQ RSLTLVGDGA FQMTGMELGN CARLGIDPVV
VVFNNASWEM LRVFQPETSY SAINTLDFAA FADALGGHGY RVTTRRELAA AFASATTERG
RFQLIDVRLE KGAISDTLAN FVAGVKRVSG VK