Gene DvMF_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0012 
Symbol 
ID7171884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp16161 
End bp17159 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content66% 
IMG OID643538504 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002434442 
Protein GI218885121 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.0116707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC TTGGGATGAA CGGGTTCGGC CGCATTGGCC GCTACCTCGT CAGACTGCTG 
GCCGAAACCG ACGACCTTGG CGTGGTTGCC ATCAACGCCC GCGCCGACAA TGCCTCTCTG 
GCCCGCCTGT TCAAGTACGA TTCGTGCCAC GGCACCTTCC GGGGCGAAGT GGGCCACGAC 
GATGCCGGAC TCATCGTCAA TGGCCGCCAC ATCGCCGTCA CCCGCGAACG CGCGGGTGAA 
TGGAAGTGGA AGGACCTCGG CATCGACATC TCGGTGGAAA CCACCGGCAC CATCAAGGAC 
CGCGCGGGCC TTGCGCAGCA CCTAGCCTGC GGCGCGAAGA AGTCCGTCAT CAGCGCCCCG 
GCCAAGGACG CCGACGTCAC CGTGGTCATG GGCGTGAACC ATGGCGACTA CGACCCGGCG 
AAGCACGACG TGATCTCCGC CGCCTCGTGC ACCACCAACT GTCTGGCCCC CGCCGCCAAG 
ACCATCCACG AGGCGTTCGG CATCAAGCAC GGCCTGATGA CCACGGTGCA CTCGTACACC 
ATGAGCCAGC GCATCCTGGA CGGTTCGCAC AAGGATCCGC GCCGCGCCCG CGCCGCGGCC 
CTGTCCATGA TCCCCACCAC CACCGGGGCG GCCAAGGCCA CCACGCTGGT CATTCCCGCG 
CTGGCGGGCA AGCTGGACGG CATGGCCGTG CGCGTGCCCA CCCCCAACGT GTCGCTGGTG 
GACCTGACCT GCGAACTGGA ACGCCCCACC AGCGTGGAAG AGGTGAACGC CCTGCTGAAG 
GCCGCGGCCG AGGGACCGCT GCTGGGCAAC ATGGGCTACA CCGAAGAGCC GCTGGTGTCC 
GTGGACTACA TGGGCTCCAT CTACGGCGGC GTGGTGGACG CGCTGTGCAC CAGCGTCATT 
GATGGCACCA TGCTGAAGCT GATCATCTGG TACGACAACG AGGCGGGCTT CACCAACCAG 
CTCGTCCGGC TGCTGCGCAT GGTCGGCAAG GGCCTGTAG
 
Protein sequence
MIKLGMNGFG RIGRYLVRLL AETDDLGVVA INARADNASL ARLFKYDSCH GTFRGEVGHD 
DAGLIVNGRH IAVTRERAGE WKWKDLGIDI SVETTGTIKD RAGLAQHLAC GAKKSVISAP 
AKDADVTVVM GVNHGDYDPA KHDVISAASC TTNCLAPAAK TIHEAFGIKH GLMTTVHSYT 
MSQRILDGSH KDPRRARAAA LSMIPTTTGA AKATTLVIPA LAGKLDGMAV RVPTPNVSLV 
DLTCELERPT SVEEVNALLK AAAEGPLLGN MGYTEEPLVS VDYMGSIYGG VVDALCTSVI 
DGTMLKLIIW YDNEAGFTNQ LVRLLRMVGK GL