| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0003 |
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| Symbol | |
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| ID | 7171870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2583 |
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| End bp | 4256 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643538490 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002434433 |
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| Protein GI | 218885112 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.0974739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACA CCACAAAGTT TACGGCCAAG GATTACAAGG AATTCTGCGC CACGTTCCGC
ATCGACGCCC CGGACACCTT CAATTTCGCC TTCGACGTGC TGGATCCCAT CGCGGCGGCT
GACCCGGGTC GGCTGTGCAT AGCCCACGTG GATGATGCGG GCGTGCGGCG CGACTACACC
TTTGCCTGGA TGGCTGAGGC TTCTGCCAAG CTGGCCAATG CGCTGCGCTT GCGGGGCATC
CGCAAGGGCG ACCGGGTGAT GCTGGTGCTG TACCGGCGCA TCGAGTTCTG GGTGTCCATG
CTGGCCCTGC ACCGCCTTGG CGCGGTGGCC ATTCCCGCCC CGGCCCAGCT CACCCCCAAG
GACATCGTGT TCCGCGTGGA GCGCGCCAAG ACCCGGTGCG TCATCGTGGA CCATTCCATC
ACCGAGCGCG TGGAGGCCGC CCGGCCCGAC TGTCCCGGCC TTGCCGTGTG CGTGCAGGTG
GGCGGCGACG CCCTGCCGCG CGGCTGGGTG GACTACGACA CCATCTTCAC CCCGGCGGAG
GCCAGGTTCC CCCGTCCGGA AAGCCCGCTG GAGTTCGCGG GCGGCGAAGA CCCGCTGCTG
ATCTTCTTTT CGTCCGGCAC CACGGGCATG CCCAAGATGG TGGAGCACGT GCACACCTAC
CCGCTGGGCC ACCTGCTGAC CGGCATGTAC TGGCACGACC TGGTGCCCGG CGACCTGCAC
CTGACCCTGG CCGACACCGG CTGGGGCAAG GCGGTGTGGG GCAAGTTCTA CGGCCAGTGG
ATGGCCGGGG CCTCGGTGTT CGTCTACGAC TTTCGGGGCA AGTTCGAACC GGCGGCCCTG
CTGGACGTGC TGGCCGCCCA CGCCGTGACC ACCTTCTGCG CGCCGCCCAC CGTGTACCGC
TTTCTGGTGC GGCAGGATCT GTCCGCGTAC GACCTGTCGA AGCTGCGCCA CTGCACCACG
GCGGGCGAAC TGCTGAACGA CAGCGTGTTC CACGACTGGA AGGCCGCCAC CGGCCTTGAA
ATCCACGAAG GCTACGGCCA GACCGAAACC ACCCTGCAAA TCGCCACGCT GCCGTGCATG
ACTCCCAAGG CGGGTTCCAT CGGTCGGCCC ATGCCCGGCT GGGACGTGGT GCTGCAGGAT
GCGGCGGGCA ACATCTGCCC CCCCGGCGAG GAAGGCGAAA TCTGCGTGCG CGTGGCCGAG
GGCCTGCCCG TGGGGTTGTT CCGGGGCTAT CTGGAAGAGC CGGAAAAGAC CGCCTCGGTC
ATGTTCGGCG GCTACTACCA CACCGGCGAC AAGGCCTGGA TGGACGAAGA CGGCTATTAC
TGGTTTCTGG GCCGCGTGGA TGACCTGATC AAGAGCTCCG GCTACCGCAT CGGGCCGTTC
GAGGTGGAAA GCGCCCTCGT GGCTCACCCC GCCGTGGTGG AGGCCGCCGT GACCGGCGTG
CCCGATCCGC TGCGCGGGCA GGCCGTGAAG GCCACCGTGG TGCTGGCCGC TGGCTACACC
GCGTCGGACG CACTGACCAA GGAGCTTCAG GACCACGTGA AGAAGGTGAC CGCGCCGTAC
AAGTACCCGC GCATCATCGA CTACGTGGCC GAGCTGCCCA AGACCATCAG CGGCAAGATC
AAGCGCGCCG AAATCCGCGA GCGTGACCAG CAGGCCAGCG GTCCCGGAGC GTAG
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| Protein sequence | MTYTTKFTAK DYKEFCATFR IDAPDTFNFA FDVLDPIAAA DPGRLCIAHV DDAGVRRDYT
FAWMAEASAK LANALRLRGI RKGDRVMLVL YRRIEFWVSM LALHRLGAVA IPAPAQLTPK
DIVFRVERAK TRCVIVDHSI TERVEAARPD CPGLAVCVQV GGDALPRGWV DYDTIFTPAE
ARFPRPESPL EFAGGEDPLL IFFSSGTTGM PKMVEHVHTY PLGHLLTGMY WHDLVPGDLH
LTLADTGWGK AVWGKFYGQW MAGASVFVYD FRGKFEPAAL LDVLAAHAVT TFCAPPTVYR
FLVRQDLSAY DLSKLRHCTT AGELLNDSVF HDWKAATGLE IHEGYGQTET TLQIATLPCM
TPKAGSIGRP MPGWDVVLQD AAGNICPPGE EGEICVRVAE GLPVGLFRGY LEEPEKTASV
MFGGYYHTGD KAWMDEDGYY WFLGRVDDLI KSSGYRIGPF EVESALVAHP AVVEAAVTGV
PDPLRGQAVK ATVVLAAGYT ASDALTKELQ DHVKKVTAPY KYPRIIDYVA ELPKTISGKI
KRAEIRERDQ QASGPGA
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