Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3283 |
Symbol | hynS |
ID | 7136332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2958233 |
End bp | 2959333 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643531626 |
Product | [Ni/Fe] hydrogenase, small subunit |
Protein accession | YP_002427636 |
Protein GI | 218667214 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAGA CCATCCTCGA CGCATTCCGG CAAAACGGCC TGAGCCGCCG CGCCTTCCTG AAGTTCTGCG CCGCCACCGC CTCCCTGCTG ACCCTGCCCC CTGCCGCCGC CGCGGCCATG GCGGAAAAGC TGGCGGGCAC TCTCCGCCCC ACGGTGATCT ACCTCTCCTA TCAGGAATGC ACCGGCTGTC TGGAATCCAT GACCCGCTCC TTCTCGCCCA CCATCGAGCA CCTCATGTTC AACAACATCT CCCTGGCCTT CAACGACACC CTTCAGGCCG CCGCCGGGGA GGCCGCCGAG GCGGCCCGGA AGGAGGCCAT GCGCAAGGCC TGGGGCAAGT ACATCCTCAT CGTGGACGGG GCCGTGCCCA TGGGAGCGGG CGGCGCCTAC TGCGTGGCCG CGGGCCAAAG CGCCGTCGAC GACCTGCGCC ATGCCGCCCA GGGGGCGGCG GCCATCATCG CCGTGGGGAC TTGCGCCGCC TTCGGCGGCG TGCCCTACGC GGCGCCCAAT CCAACCGGCG CGGTGCCGGT TTCCGAGGTC ATCCGCGACC GCCCCATCAT CAACGTCTCT GGCTGTCCGC CCATTCCCGA GGTCATGACC GGGGTCGTCG TCTATTACCT GAGCTTCGGG ATGCCCGCCC TGGACCGCCA GGGGCGGCCG TTGACGTTTT ACGGCAACAG CATCCACGAC CGCTGTTACC GTCGGCCTTT CTATGATGAA GGTCGTTTCG CCCACACCTT CGACGACGAG GGGGCGCGCA ACGGCTGGTG CCTCTATGAG CTGGGCTGCA AAGGGCCGGT GACCTACAAC GCCTGCGCCA CCCTGAAATG GAACCAGGGG ACCAGCTTTC CCATCCAGTC CGGCCACGGC TGCCTGGGCT GCTCCGAGCC GGACTTTTGG GACAAGGGCG GATTTTACCG GCCTCTGCCC GCAGCCACCG GCCACTGGCC GCGCGGAGAG GTTTTGGGCG GTGCGGCGCT AGGGGGAGCG GTGGTCGGGG TGGGAGCGGC GGCGCTCGCC CGCTCCCGTC AGCACGCGGT CGCGAAAAGC GCCAAAGAGG CAAGCAGCCC GCCCCCAAGG GAGGATTCCC ATGAGCACTG A
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Protein sequence | MDETILDAFR QNGLSRRAFL KFCAATASLL TLPPAAAAAM AEKLAGTLRP TVIYLSYQEC TGCLESMTRS FSPTIEHLMF NNISLAFNDT LQAAAGEAAE AARKEAMRKA WGKYILIVDG AVPMGAGGAY CVAAGQSAVD DLRHAAQGAA AIIAVGTCAA FGGVPYAAPN PTGAVPVSEV IRDRPIINVS GCPPIPEVMT GVVVYYLSFG MPALDRQGRP LTFYGNSIHD RCYRRPFYDE GRFAHTFDDE GARNGWCLYE LGCKGPVTYN ACATLKWNQG TSFPIQSGHG CLGCSEPDFW DKGGFYRPLP AATGHWPRGE VLGGAALGGA VVGVGAAALA RSRQHAVAKS AKEASSPPPR EDSHEH
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