Gene AFE_3260 details

Gene Information

• Locus tag: AFE_3260
• Symbol: mscL
• ID: 7136564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2936484
• End bp: 2936939
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643531603
• Product: large conductance mechanosensitive channel protein
• Protein accession: YP_002427613
• Protein GI: 218665701
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAAAA AATTCGTCCA GGATTTCAAA ACATTTCTGC AGCGCGGTAA TGTCATCGAT 
CTCGCCGTAG CTTTTGTGAT CGGGTCGGCA TTTTCCGCCA TCGTTACTTC GCTGGTCAGC 
AACGTGATCA TGCCGCCTAT CGGCATGCTG CTCGACAGGG TCGATTTTTC CAACCTCTAT 
ATCCTATTGA AGCAAGGCAC CGTTCCCGGC CCTTACCTGA CCCTGGAAGC CGCCAAAAAG 
GCAGGCGCCG TGACCGTGAA CTACGGCCTC TTCATTACCT CGCTGATCAG CTTTTTCATC 
ATCGCCCTGG TGATATTTTC CATTGTGCGG GCGATCAACA AGCTCTACCC CAAACCCGTC 
CCCGCCACGA CCACCAAAAC CTGCCCCTTC TGTGCCTCCG CCATTCCCTT GGCCGCGATA 
CGTTGTCCCA ACTGCACCTC GCAACTGGAG TCCTGA 

 

Protein sequence

MLKKFVQDFK TFLQRGNVID LAVAFVIGSA FSAIVTSLVS NVIMPPIGML LDRVDFSNLY 
ILLKQGTVPG PYLTLEAAKK AGAVTVNYGL FITSLISFFI IALVIFSIVR AINKLYPKPV 
PATTTKTCPF CASAIPLAAI RCPNCTSQLE S