| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3258 |
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| Symbol | ispH |
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| ID | 7137070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2933928 |
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| End bp | 2934878 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643531601 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002427611 |
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| Protein GI | 218665147 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TGTTAGCCAA TCCGCGTGGT TTCTGCGCGG GGGTCAACCG GGCGATTCAG
ATCGTCGATC GCGCCCTGGA GCTTTTCGGT GCGCCTATCT ATGTGCGTCA CGAGGTCGTT
CACAACCGTC ACGTCGTCGA AGACCTGCGC GCCCGTGGCG CCATTTTCGT CGAGGAGCTG
GATGAAGTAC CGGACGCGGC TACGGTCATT TTCAGTGCCC ATGGCGTGCC CATCGCCGTC
CGTGAGCACG CGGCGGCGCG GGGTCTGAGC GTCTTCGACG CCACCTGCCC GCTGGTGACC
AAGGTGCATA TGGAAGTCAA GAAATACAGC CGGGACGGTA TGGAAATGGT GCTCATCGGT
CACGCCGGAC ACCCGGAGGT GGAAGGCACC ATGGGTCAGG TCGAGGAGGG CATGATGTAT
CTGGTTTCCA ATGTCTCCGA TGTGGCCACC CTGGCGCCCC GCAACCCGGA CAAGCTCGCC
TACATCACTC AGACCACCTT GAGCATGGAT GACACCGCAG AAGTGATCGT CGCCTTGCGC
TCACGTTTTC CCCTCATCGA AGGCCCGAAA AAAGATGATA TCTGTTATGC CACCCAGAAC
CGCCAGGACG CGGTGAAGTC GCTGGCCCCT GATGTCGACA TCCTGCTGGT GGTGGGTGCG
CCGAACAGTT CCAATTCCAG CCGTCTGGCA GAACTGGGGA CGCGGCTGGG GACGCAGACC
CATCTCATCG AGGACGCTCA GCAGTTGCGC CGCGAATGGT TCGAAGGTGT GGGGAAGATT
GGTATCAGTG CCGGGGCTTC GGCGCCGGAA AGCCTGGTCC AGGAGATTAT GGACACCCTC
CGGGGCTGGG GCGCCAGAGT GCCCCAAGAA ATGCCCGGCG TAGAGGAAAA GGTGACTTTC
AGCCTGCCTC TGGCGCTGAT ACAGGCGCAG ACGCGGCGGG AAGGCGCCTG A
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| Protein sequence | MDILLANPRG FCAGVNRAIQ IVDRALELFG APIYVRHEVV HNRHVVEDLR ARGAIFVEEL
DEVPDAATVI FSAHGVPIAV REHAAARGLS VFDATCPLVT KVHMEVKKYS RDGMEMVLIG
HAGHPEVEGT MGQVEEGMMY LVSNVSDVAT LAPRNPDKLA YITQTTLSMD DTAEVIVALR
SRFPLIEGPK KDDICYATQN RQDAVKSLAP DVDILLVVGA PNSSNSSRLA ELGTRLGTQT
HLIEDAQQLR REWFEGVGKI GISAGASAPE SLVQEIMDTL RGWGARVPQE MPGVEEKVTF
SLPLALIQAQ TRREGA
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