| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3246 |
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| Symbol | gph-2 |
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| ID | 7135886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2922433 |
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| End bp | 2923116 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643531589 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_002427599 |
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| Protein GI | 218667834 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.181824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC TGAATGCCGG CACGCGGTTT ACCGCGCGCG TCGTCCTGCT CGATCTGGAT
GGCACGCTGG TAGATACCGC GCCGGACCTG GCTGGCGCGG CCAACCATGT GCTGCAAAAA
CTCGGGCGTG CGCCCGCCGA AATGCCGGTC ATTCGTGGCT TCATCGGTAA CGGTGTCCGT
GAACTGATGC GTCGCGCGCT GGCGATCCAC AGCGATCCCA GCGAAGTGGA ACTGGATGCG
GCCATGGTCG ATTTCAGCAA GTACTACGGA GAGCATCTGC TGGATCATAG CGTGATCTAC
CCGGGCGTGC GCAGAACGCT GGAGACCTTG CAGGCTCAGG GCCGGGAACT GGTATGTATC
ACCAACAAGA CCGCCGCCTT CACCGTGCCG CTGCTCCAGC GACTGGACCT CTACGATTTT
TTCGGCCTGA TCTTGTCGGG CGACAGCCTG CCACGGAAAA AGCCCGACCC GTTACCCCTG
ACCCATACGG CTGAACACTT TCATCAGCCG GTGGAGAACT GCCTGCTGGT CGGCGATTCA
CGTAACGACG CTGAGGCGGC GCGGGCGGCG GGTATGCCCG TTGCCTGCGT GACCTACGGT
TATAACGGCG ATGAGCCCGT CCATTGCCTG GAGCCCGATG CGGTGCTGGA CAACATGAGC
GAATTATTGG ATATTCTGGC GTAG
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| Protein sequence | MATLNAGTRF TARVVLLDLD GTLVDTAPDL AGAANHVLQK LGRAPAEMPV IRGFIGNGVR
ELMRRALAIH SDPSEVELDA AMVDFSKYYG EHLLDHSVIY PGVRRTLETL QAQGRELVCI
TNKTAAFTVP LLQRLDLYDF FGLILSGDSL PRKKPDPLPL THTAEHFHQP VENCLLVGDS
RNDAEAARAA GMPVACVTYG YNGDEPVHCL EPDAVLDNMS ELLDILA
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