Gene AFE_3214 details

Gene Information

• Locus tag: AFE_3214
• Symbol: gidA
• ID: 7134309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2895394
• End bp: 2897268
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643531559
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002427570
• Protein GI: 218668068
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAACT CATTTGACGT TATCGTAGTC GGCGGCGGTC ACGCCGGGAC GGAAGCGGCT 
GCCGCAGCCG CCCGTCTCGG CGTGCGCACG CTTCTGCTTA CCCAGAATCT CGATACCATC 
GGCCAGATGT CCTGCAACCC GGCCATCGGT GGCATCGGCA AAGGTCATCT GGTCAAAGAA 
GTCGATGCGC TCGGCGGCAT CATGGCTCTC GCCATCGATC AGGCGGGCAT CCAGTTCCGC 
ACCCTCAACG CCAGCAAAGG TCCGGCGGTG CGCGCGACCC GCGCCCAGGC CGATCGCAGT 
CTGTACAAAC GTGCCGTACG CCGTTTGCTC GAAGACATAC CCGCCCTGCA ACTATTCCAG 
GGCATGGTCG GCGATCTGCT CATGGAAGGC GACCGGCTGG GTGGCGTCAT TCTGGAAACC 
GGCCTGGTGC TGCGTGCCGC ACAGGTCGTT CTGACCACAG GCACCTTTTT GGGTGGCCGG 
GTGCACATGG GGGATCAGAA TTACCCCGCC GGCCGCGCCG GCGACCCGCC ATCCAACGCT 
CTGGCCCAGC GCCTGCGGGA GATGGCCTTC CCGGTGGCGC GGCTGAAAAC CGGTACCCCG 
CCGCGCATCG ACGGCCGCAG CATCGACTAT GGGGTGCTGG AGGCCCAACC CGGCGATGCG 
CCACCGCCCG CTTTTTCCTT TATGACCCGG CGTATCGGTG TGCCACAACT GGCCTGCCAC 
ATCACCCACA CCAACGCCCG CACCCACGAA ATCATTCAGA CGAACCTGCA CCAGTCGGCC 
ATGTACGGCG GTCATATCCA GTCGGTAGGG CCGCGTTACT GTCCCTCCAT CGAGGACAAG 
GTCGTGCGCT TTGCCGATAA GGCGTCGCAT CAGGTTTTTC TGGAACCAGA AGGCCTCGAT 
ACCCACGAAG TCTACCCCAA CGGTATCTCC ACCAGCCTGC CCTTCGGTGT CCAGATCGAA 
CTGGTGCGCA GCATGCGCGG TCTGGAAAAC GCCGTATTGC TGCGCCCCGG TTACGCCATC 
GAGTACGACT ACCTCGATCC CCGCGAGCTC CACCCCAGTC TGGAAAGCCG ACGCTTGCCG 
GGTCTGTTCT GTGCCGGCCA GATCAACGGC ACCACCGGCT ACGAGGAGGC TGCGGCCCAG 
GGACTGCTCG CCGGTCTCAA CGCCGCCCGC CGCGCGCGCG AACTCGCGGC GTGGACGCCC 
GGTCGCCACG AAGCCTATCT AGGGGTGATG GTGGATGATC TTGTCACCCG CGGACTCGAC 
GAACCCTACC GCATGTTCAC CAGCCGCGCC GAATATCGCC TGCAACTGCG GGAGGACAAT 
GCCGACCTGC GTCTGACGCC CCATGGCCGG GCATTGGGGC TGGTAGATGA CCAGCGCTGG 
ACGGCCTTCA GTGCCAAGCA GGACGCGGTG CAGGCGGAGC GCAACCGTCT CGAGGGCTTG 
CGCATCCATC CCGGCAGCGC CATCGCCGGG CGTATTGCGG CGAAGACGGA TCAGCCCCTT 
TCCCGCGATG TCACTGCTCT CGAACTCCTC CGCCGCCCCG ACTGGGATTA CGCCAGCCTG 
CTCCAGGTGC TCGATCTCGT TCCGTGCAGC GATGCGCAGG CCTGCGAACA ACTGGAGATC 
GAGTGCAAAT ATGCCGGCTA TGTCGCCCGC CAGCACGACG AGATCACTCG CGCCGCGCGC 
TGGGAGGGAA CGGATATCCC TGCCGACATG GACTACGCAG CGGTGCGGGG CCTCTCTACC 
GAAGTGATGC AGCGCCTCGC CCGTCAGCGA CCGCAGACCA TCGGTTTGGC CAGCCGTATC 
CCTGGTGTGA CCCCGGCCGC CGTCTCCCTG CTTCTGATTC ATGTGAAACG TCGCGGTCTG 
CGGCAGGCGG GCTGA 

 

Protein sequence

MQNSFDVIVV GGGHAGTEAA AAAARLGVRT LLLTQNLDTI GQMSCNPAIG GIGKGHLVKE 
VDALGGIMAL AIDQAGIQFR TLNASKGPAV RATRAQADRS LYKRAVRRLL EDIPALQLFQ 
GMVGDLLMEG DRLGGVILET GLVLRAAQVV LTTGTFLGGR VHMGDQNYPA GRAGDPPSNA 
LAQRLREMAF PVARLKTGTP PRIDGRSIDY GVLEAQPGDA PPPAFSFMTR RIGVPQLACH 
ITHTNARTHE IIQTNLHQSA MYGGHIQSVG PRYCPSIEDK VVRFADKASH QVFLEPEGLD 
THEVYPNGIS TSLPFGVQIE LVRSMRGLEN AVLLRPGYAI EYDYLDPREL HPSLESRRLP 
GLFCAGQING TTGYEEAAAQ GLLAGLNAAR RARELAAWTP GRHEAYLGVM VDDLVTRGLD 
EPYRMFTSRA EYRLQLREDN ADLRLTPHGR ALGLVDDQRW TAFSAKQDAV QAERNRLEGL 
RIHPGSAIAG RIAAKTDQPL SRDVTALELL RRPDWDYASL LQVLDLVPCS DAQACEQLEI 
ECKYAGYVAR QHDEITRAAR WEGTDIPADM DYAAVRGLST EVMQRLARQR PQTIGLASRI 
PGVTPAAVSL LLIHVKRRGL RQAG