Gene AFE_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3107 
SymbolcycA-1 
ID7135444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp2792679 
End bp2793383 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content52% 
IMG OID643531458 
Productcytochrome c4 
Protein accessionYP_002427469 
Protein GI218665058 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0350454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTG ACACAATTGC TTATGGAGCG GCAAGCGCAC CGAACAGCAA GATTGTTGCT 
GCCACCGTTT CTTCGTCCGC GGCCGTTACG GCTCCAACGC AATCCGTGGC GAGTGCACAG 
AAAACGACGG ATACCAATGC GGGAGGCATT CCGCAACCGG TAAGCACTAC CTGTATGGCA 
TGTCACGGAA TGACTGGAAT ATCCCCCGGT GGATCAATGT TTCCAGATTT GGCTGGTCAG 
TGGGCTCCCT ATCTGGTCAA ACAACTCAAT AACTTTAGAA GTCATACGCG TGCGGATCCC 
ATGGCAAAGG CTATTATGTG GGGCATGGCC GCGTCGCTGA CGCCGGCACA GGTGCAACAG 
GTAGCAAATT ACTTCTCTAC CCAGACTCCA CCGAAAGCAA AAATGGTAAA CGCTAAACTA 
GCGGCAGAAG GAAAGAAGAT ATATGAAGGT GGAATATCTA ACCTTCATGT GCCTGCCTGT 
ATGGCATGCC ATGGCCCAAC CGGTCTGGGT GACCCGCCTT ACTTTCCTCG CTTGGCAGGT 
CAACGACGAG CCTACGTAGA ATTGCAGCTG CATTATTTCA AAAAAGGTCT TAGAACCAAT 
GATCCGTATG CCATAATGCG GTACGTCGCC TCGCGGCTAA CGGGGCCGCA GATTACCGAG 
TTAGCAACCT ATGTACGCAG TTTACCCGGA GGTGCTAATG AATAA
 
Protein sequence
MPFDTIAYGA ASAPNSKIVA ATVSSSAAVT APTQSVASAQ KTTDTNAGGI PQPVSTTCMA 
CHGMTGISPG GSMFPDLAGQ WAPYLVKQLN NFRSHTRADP MAKAIMWGMA ASLTPAQVQQ 
VANYFSTQTP PKAKMVNAKL AAEGKKIYEG GISNLHVPAC MACHGPTGLG DPPYFPRLAG 
QRRAYVELQL HYFKKGLRTN DPYAIMRYVA SRLTGPQITE LATYVRSLPG GANE