Gene AFE_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3030 
Symbol 
ID7135491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2721063 
End bp2722049 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID643531381 
Productsugar isomerase, KpsF/GutQ family 
Protein accessionYP_002427397 
Protein GI218667398 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCC TGAACGTGAC GCCGGAAACT CTGCTCATGA CCGGTCGCGA TGTGCTGCGC 
CTGGAAGCTG CGGCAGTGGC GGCACTGGAG GAGCGCCTCG ACGCAGATTT CGTGGGAGCA
TGTGAACTTC TGCTGAACTG CTCTGGCCGC ATTGTCGTTA GTGGCATGGG CAAGTCCGGG
ATTATCGCCA AAAAAATCGC GGCGACCTTG GCCAGTACCG GCAGCCCCGC TCTTTTCCTG
CATCCCGCCG AAGGCAGCCA TGGTGATCTG GGTATGCTGA CTCGTCAGGA TTGTCTGCTC
GCGCTCTCCA ATTCCGGAGA GACCGCCGAA CTCCTCGCTA TTCTGCCGGT AGTCAAGCGC
CTCGCGGTGC CGCTGCTTGC CATGACCGGT AATCCGCAGT CTACCCTGGC GCGAACCGCT
GCTGTCCATC TCAACTGCAG TGTGGCGCGG GAGGCCTGCC CCCTCAATCT GGCACCGACG
GCCTCGACCA CGGCAAGCCT GGCCATGGGT GATGCCCTGG CCATGGCGAT CCTGCAGGCC
CGTGGCTTTT CGGCGGACGA CTTTGCCCTG TCCCATCCTG GCGGCAGCCT CGGCAAACGC
CTGTTGCTGC GGGTTCAGGA CGTTATGCAC CGGGGTGATG CAATACCTCG TGTGGGGCTG
GAGACACCGT TGCAGGATGC GATCCTGGAA ATCAGCAGCA AGGGGCTGGG AATGACAGCG
GTGGTCGATG CCGAAGACCG AGTGGTAGGA ATTTTTACCG ATGGCGATTT GCGTCGCGCC
TTTGCCCAGC GTCAGAATCT TTGGGAGCAG CCCATGGCCG CGCTGGCGCA TGCCCAACCG
GCCACGATCG CCGCCGGAGC CCTTGCTGCC GAGGCCCTTG CACTGATGGA ACATCATCGC
ATCGGCGCAC TGCTGGTCAC TGATAGCGGG GCACGGCTGA TCGGCGCCCT GAATATGCAC
GATTTGCTGC GCGCAGGTAT CGTGTGA
 
Protein sequence
MPALNVTPET LLMTGRDVLR LEAAAVAALE ERLDADFVGA CELLLNCSGR IVVSGMGKSG 
IIAKKIAATL ASTGSPALFL HPAEGSHGDL GMLTRQDCLL ALSNSGETAE LLAILPVVKR
LAVPLLAMTG NPQSTLARTA AVHLNCSVAR EACPLNLAPT ASTTASLAMG DALAMAILQA
RGFSADDFAL SHPGGSLGKR LLLRVQDVMH RGDAIPRVGL ETPLQDAILE ISSKGLGMTA
VVDAEDRVVG IFTDGDLRRA FAQRQNLWEQ PMAALAHAQP ATIAAGALAA EALALMEHHR
IGALLVTDSG ARLIGALNMH DLLRAGIV