Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3030 |
Symbol | |
ID | 7135491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2721063 |
End bp | 2722049 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643531381 |
Product | sugar isomerase, KpsF/GutQ family |
Protein accession | YP_002427397 |
Protein GI | 218667398 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCCC TGAACGTGAC GCCGGAAACT CTGCTCATGA CCGGTCGCGA TGTGCTGCGC CTGGAAGCTG CGGCAGTGGC GGCACTGGAG GAGCGCCTCG ACGCAGATTT CGTGGGAGCA TGTGAACTTC TGCTGAACTG CTCTGGCCGC ATTGTCGTTA GTGGCATGGG CAAGTCCGGG ATTATCGCCA AAAAAATCGC GGCGACCTTG GCCAGTACCG GCAGCCCCGC TCTTTTCCTG CATCCCGCCG AAGGCAGCCA TGGTGATCTG GGTATGCTGA CTCGTCAGGA TTGTCTGCTC GCGCTCTCCA ATTCCGGAGA GACCGCCGAA CTCCTCGCTA TTCTGCCGGT AGTCAAGCGC CTCGCGGTGC CGCTGCTTGC CATGACCGGT AATCCGCAGT CTACCCTGGC GCGAACCGCT GCTGTCCATC TCAACTGCAG TGTGGCGCGG GAGGCCTGCC CCCTCAATCT GGCACCGACG GCCTCGACCA CGGCAAGCCT GGCCATGGGT GATGCCCTGG CCATGGCGAT CCTGCAGGCC CGTGGCTTTT CGGCGGACGA CTTTGCCCTG TCCCATCCTG GCGGCAGCCT CGGCAAACGC CTGTTGCTGC GGGTTCAGGA CGTTATGCAC CGGGGTGATG CAATACCTCG TGTGGGGCTG GAGACACCGT TGCAGGATGC GATCCTGGAA ATCAGCAGCA AGGGGCTGGG AATGACAGCG GTGGTCGATG CCGAAGACCG AGTGGTAGGA ATTTTTACCG ATGGCGATTT GCGTCGCGCC TTTGCCCAGC GTCAGAATCT TTGGGAGCAG CCCATGGCCG CGCTGGCGCA TGCCCAACCG GCCACGATCG CCGCCGGAGC CCTTGCTGCC GAGGCCCTTG CACTGATGGA ACATCATCGC ATCGGCGCAC TGCTGGTCAC TGATAGCGGG GCACGGCTGA TCGGCGCCCT GAATATGCAC GATTTGCTGC GCGCAGGTAT CGTGTGA
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Protein sequence | MPALNVTPET LLMTGRDVLR LEAAAVAALE ERLDADFVGA CELLLNCSGR IVVSGMGKSG IIAKKIAATL ASTGSPALFL HPAEGSHGDL GMLTRQDCLL ALSNSGETAE LLAILPVVKR LAVPLLAMTG NPQSTLARTA AVHLNCSVAR EACPLNLAPT ASTTASLAMG DALAMAILQA RGFSADDFAL SHPGGSLGKR LLLRVQDVMH RGDAIPRVGL ETPLQDAILE ISSKGLGMTA VVDAEDRVVG IFTDGDLRRA FAQRQNLWEQ PMAALAHAQP ATIAAGALAA EALALMEHHR IGALLVTDSG ARLIGALNMH DLLRAGIV
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