| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2936 |
|---|
| Symbol | |
|---|
| ID | 7137266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2623588 |
|---|
| End bp | 2625240 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643531288 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002427304 |
|---|
| Protein GI | 218667848 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0884836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC GGAATCGTAT GAACCCGTTA TTGTTCGCAA TGTGCACCGC AGGGTTTTGC
ACCTGGAATA CCATAACAGC AGCTTATGGT GCCAATTCAG GCAGCCAATC CACCAGTGTC
GGCGAGGTAA ACGCTTCGGC CAGCGCACTT TCTGAATCTG CCAAGGCGCT GGCCAGCACT
GACGGCAAGC TGACCAGGAA GAAAATCTTC AAATCCACCC AATCCCAGGC GGTTGTCGGG
AAGCGTGAAA TTCAGGGTGT AGGTCCCGCC GCAGGGGCGG CCCAGGCACT CTCTCTGGCA
CCCGGCATCG CCGTTCGTGG TTATGGCGGC ATCTCCTCGA CCGCGCGCTA TGAAATCGCG
GTGCGCGGCG TAAAGGTAGG CTGGTCATCC GTGAATGGCG ACGTCGAACG CAATGGCTTG
ACGGTGCTGT TTGACGGAAT CCCCATGAAC AACCTGATTT CACATAACGG CGGCTGGGAT
TCCAACGAAA TCCCCATTCT CCAGATGATC CATGGCATCA ACGTGACCTA CGGCCCCGGA
AATCCCGCCG GCCGGTGGTT CGACAGCGTC GGTGGCACCA TCAACTTTGT GCCGCTGCAG
CCATCCGTAA AACCGAGCGC CGAGATAGGT ACCACCTTTG GCAGTAACGG CACCCTCGGC
TACAACTTCG ATCTCAAAAC GGGAATGTAC GATGGCTGGT CCGCGATCCT GGCCGGAGGT
TATACGAAAA ACAATACGTT CCGCACAGGT ACGTTCAATG CGCCGTCCCA GTCTCTCGCC
TATTTTGGCA AGGCGGTGAA GACCTTCCGG AGTGGCACCT TCAGCCTTGG CGGCTATGTC
GACAGTTCGC GCGAGTTCAG GCCCAATTTC ATACCGGTTA CCCCGATACA GGGCATCACC
ACCCAGGGCC TGAACGCCAA TGCGCCTTTG TATAGCCAAC AGACCAGCGG GTTTTACGCA
TCACTGCCTG AGTCCATCTG GTTTAAGCAA TTGAAAGTGC AAGGCTACAT GCTGTACTCC
AAGCTGAACC TCCGCCTCAG CAGGGACGTC ACGCTGCACG AAATGGCCTG GTATCGCCAT
GGCCACCGGG TGCATTACCG CATCACCAAC TTTGTACCAG GAAGCAGCGT AAATTCCGAG
TATTACAACC CGAGCTCGGA TACTTATGGG GACAAGCTGT ATTTCGACTG GCGCCTGCCT
ATGAACCTCG TGAAGGCCGG AGGGTCATGG ATTCATCAGC AATACACCAC ACCTTATGCG
GGATACAATA CGCTTCTGGG CACCAGTCCC TCCTTCCCCA TTCAGTACAA TAGTGACGTT
CTGTATAACA ACTATCTGAC AGGCTTCGTT CAGGACACGT TCACTCCGTT CTCCGGCTTC
AAGATTACTC CGGGCATTGC TGCGGTCCAG TACCAGACCC AGATGTACAA TAATGGGGCC
CAGGCATTCC CCAACCTTCC GGCGGGCGCG CAGAATCAGA CGCTCATTAA TAGCGCTTCG
GATACCATAT CCCGCTTGGA ACCTTCCATC GGGGTCCGCT TTGCACCGGT CAAATGGGGT
TCGGTATATG CGCACTATGG CCGTTCTTAT CAGAATCCTA CGGATAACAA CTACGGGGCC
TACAATGGTA ACGGCGGCAC CATAGATCTG TAA
|
|---|
| Protein sequence | MNKRNRMNPL LFAMCTAGFC TWNTITAAYG ANSGSQSTSV GEVNASASAL SESAKALAST
DGKLTRKKIF KSTQSQAVVG KREIQGVGPA AGAAQALSLA PGIAVRGYGG ISSTARYEIA
VRGVKVGWSS VNGDVERNGL TVLFDGIPMN NLISHNGGWD SNEIPILQMI HGINVTYGPG
NPAGRWFDSV GGTINFVPLQ PSVKPSAEIG TTFGSNGTLG YNFDLKTGMY DGWSAILAGG
YTKNNTFRTG TFNAPSQSLA YFGKAVKTFR SGTFSLGGYV DSSREFRPNF IPVTPIQGIT
TQGLNANAPL YSQQTSGFYA SLPESIWFKQ LKVQGYMLYS KLNLRLSRDV TLHEMAWYRH
GHRVHYRITN FVPGSSVNSE YYNPSSDTYG DKLYFDWRLP MNLVKAGGSW IHQQYTTPYA
GYNTLLGTSP SFPIQYNSDV LYNNYLTGFV QDTFTPFSGF KITPGIAAVQ YQTQMYNNGA
QAFPNLPAGA QNQTLINSAS DTISRLEPSI GVRFAPVKWG SVYAHYGRSY QNPTDNNYGA
YNGNGGTIDL
|
|---|
| |