Gene AFE_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2899 
SymbolispB 
ID7135839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2575100 
End bp2576068 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content59% 
IMG OID643531251 
Productoctaprenyl-diphosphate synthase 
Protein accessionYP_002427267 
Protein GI218665678 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGG AGGAAGTCAA CCGCCTCGTA CGGGCCGATA TGGCGGCGGT GAACAGCGTT 
ATCCAGGAAC AATTGCGTTC GGGGGTGCCG ACCATTCCGG CCATGGGGAC TTACCTGATC
AATGCCGGCG GCAAAAGGCT GCGGCCCATT GTTCTGCTGC TCGCCGCACG CATGGGTGGT
GAGCGTGGTC CGCGTCCGAT CTCTCTGGCG GCTGTTGTCG AGTTTATCCA TACGGCGACG
CTGCTGCATG ATGACGTAGT CGATGGTTCC GAACTGCGGC GCAGCAATGC GACTGCCAAT
CAACGCTGGG GCAACGCCGC CGCCGTACTC GTCGGGGATT TTCTTTACGC CCGATCCTTC
GAGATGATGG TACAGGACGG TGATATGCGT ATCCTCGCCA CCATGGCGGA GGCCACCAGC
GTTATTGCCC AGGGAGAGGT TGCGCAACTG GAGAATGCCA ACGATCCCGA TCTGAGTCCT
GAGGCGTACT TCGCGGTCAT AGAAGCCAAG ACCGCCAAGC TCTTCGAGGC CGCCGCCCGT
ATCGGGGCGC TGGTAAACGA ACTGGATGCC GCTGCGGAGA AGGCCTTGGC GCAATACGGC
TCGCTGCTCG GCATCGCCTT TCAGTTGATG GATGATGCCT TGGATTACTC CACCAGCGCC
GAGAAAATGG GCAAAAACCG GGGCGACGAT CTGGCGGAAG GCAAGGCAAC CCTGCCCTAT
ATCCACGCCA TGCAGCATGC CACGGCGGCG GAGCAGGCCA TTTTGCGTGA AGCACTGAGC
GGCAATGCGC CAGCCGTCTT TGGAACGGTC TGGGAAATCA TTGCCAGAAC AGGGTCAATT
GATTACACTT TGCGCGTCGC GAAGGAAAAG GCGGATCAGG CCATTGCTTG TCTGTCCGGG
TTTCCGGCAG GTATGGAGAA GGAAGCTCTG GCTTTTTTGG CGGCATTTGC CGTGCGGCGT
GATTTTTGA
 
Protein sequence
MNLEEVNRLV RADMAAVNSV IQEQLRSGVP TIPAMGTYLI NAGGKRLRPI VLLLAARMGG 
ERGPRPISLA AVVEFIHTAT LLHDDVVDGS ELRRSNATAN QRWGNAAAVL VGDFLYARSF
EMMVQDGDMR ILATMAEATS VIAQGEVAQL ENANDPDLSP EAYFAVIEAK TAKLFEAAAR
IGALVNELDA AAEKALAQYG SLLGIAFQLM DDALDYSTSA EKMGKNRGDD LAEGKATLPY
IHAMQHATAA EQAILREALS GNAPAVFGTV WEIIARTGSI DYTLRVAKEK ADQAIACLSG
FPAGMEKEAL AFLAAFAVRR DF