Gene AFE_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2850 
SymbolxerD 
ID7134491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2536180 
End bp2537088 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID643531203 
Producttyrosine recombinase XerD 
Protein accessionYP_002427220 
Protein GI218667700 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGTG CCGGTCTGTC CGCCGAACGG CAGCGGATCG ACACCTTTCT TGACGCCCTG 
TGGCTGGAAA AAAACCTTGG TGAAAATACC CTGACCGCTT ATCGTCAGGA TTTGCTGCAG
GTAGCCGCCG CGCTCGCGGA GTGGGATTTG ACCCTGACTA CCGCTGACGA CGGCGCCCTG
GCGCGCATAC TGGGACAGAG GTTACAGTCC GGGGCCGCCC TGCGCTCCGT AGTCCGCCTG
CTCTCCAGTG TGCGCCGTTT TTACGGTTAC GCGGAGCGGG AGGGCTGGGT ATCCCGTGAC
CCCAGTCGCA ACCTGCAGAG TCCTCGTATC GGCCGCGTAC TACCCCACGT TCTCAGCGAA
ACGGAAATAG AGGCCCTGCT GGCGGCCCCC GATTGTACCC ACCCGTTGGG CCTGCGTGAC
GCAGCCATGC TGGAACTGAT GTACGCCTGC GGTTTGCGGG TATCGGAACT GGTGAATCTG
GAGACGCGCC AAGTGGACCT CAGCGCCGAT ATGGTGGTGG TCTTTGGCAA GGGTCGCAAG
GAACGCTTGG TGCCCATGGG AGAAGTGGCG GCCGGCCGCG TGACCCAGTA TCTGCAGATG
GGTCGCCCGC AGATACTGGG TCAGCGCATC AGTGCCGCCC TTTTTGTGAC TGGGCGGGGG
GCTGCCATGA CGCGCCAGCG TTTCTGGCAA AACATTGAAC GTTACGCCCG GTCTGCGGGA
ATCACTCAGA CCGTATCGCC GCACAGCCTG CGTCACGCCT TTGCCACCCA CCTGCTGAAT
CACGGCGCGG ACCTGCGCAG TGTGCAGTTG ATGCTGGGAC ACGCCGCCCT GTCCACCACG
GAGATATATA CCCATGTGGC GCAGGCGCGG CTCAAGGCGC TGCACGCGAA GCATCACCCG
CGCGGGTGA
 
Protein sequence
MPSAGLSAER QRIDTFLDAL WLEKNLGENT LTAYRQDLLQ VAAALAEWDL TLTTADDGAL 
ARILGQRLQS GAALRSVVRL LSSVRRFYGY AEREGWVSRD PSRNLQSPRI GRVLPHVLSE
TEIEALLAAP DCTHPLGLRD AAMLELMYAC GLRVSELVNL ETRQVDLSAD MVVVFGKGRK
ERLVPMGEVA AGRVTQYLQM GRPQILGQRI SAALFVTGRG AAMTRQRFWQ NIERYARSAG
ITQTVSPHSL RHAFATHLLN HGADLRSVQL MLGHAALSTT EIYTHVAQAR LKALHAKHHP
RG