Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2850 |
Symbol | xerD |
ID | 7134491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2536180 |
End bp | 2537088 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643531203 |
Product | tyrosine recombinase XerD |
Protein accession | YP_002427220 |
Protein GI | 218667700 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAGTG CCGGTCTGTC CGCCGAACGG CAGCGGATCG ACACCTTTCT TGACGCCCTG TGGCTGGAAA AAAACCTTGG TGAAAATACC CTGACCGCTT ATCGTCAGGA TTTGCTGCAG GTAGCCGCCG CGCTCGCGGA GTGGGATTTG ACCCTGACTA CCGCTGACGA CGGCGCCCTG GCGCGCATAC TGGGACAGAG GTTACAGTCC GGGGCCGCCC TGCGCTCCGT AGTCCGCCTG CTCTCCAGTG TGCGCCGTTT TTACGGTTAC GCGGAGCGGG AGGGCTGGGT ATCCCGTGAC CCCAGTCGCA ACCTGCAGAG TCCTCGTATC GGCCGCGTAC TACCCCACGT TCTCAGCGAA ACGGAAATAG AGGCCCTGCT GGCGGCCCCC GATTGTACCC ACCCGTTGGG CCTGCGTGAC GCAGCCATGC TGGAACTGAT GTACGCCTGC GGTTTGCGGG TATCGGAACT GGTGAATCTG GAGACGCGCC AAGTGGACCT CAGCGCCGAT ATGGTGGTGG TCTTTGGCAA GGGTCGCAAG GAACGCTTGG TGCCCATGGG AGAAGTGGCG GCCGGCCGCG TGACCCAGTA TCTGCAGATG GGTCGCCCGC AGATACTGGG TCAGCGCATC AGTGCCGCCC TTTTTGTGAC TGGGCGGGGG GCTGCCATGA CGCGCCAGCG TTTCTGGCAA AACATTGAAC GTTACGCCCG GTCTGCGGGA ATCACTCAGA CCGTATCGCC GCACAGCCTG CGTCACGCCT TTGCCACCCA CCTGCTGAAT CACGGCGCGG ACCTGCGCAG TGTGCAGTTG ATGCTGGGAC ACGCCGCCCT GTCCACCACG GAGATATATA CCCATGTGGC GCAGGCGCGG CTCAAGGCGC TGCACGCGAA GCATCACCCG CGCGGGTGA
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Protein sequence | MPSAGLSAER QRIDTFLDAL WLEKNLGENT LTAYRQDLLQ VAAALAEWDL TLTTADDGAL ARILGQRLQS GAALRSVVRL LSSVRRFYGY AEREGWVSRD PSRNLQSPRI GRVLPHVLSE TEIEALLAAP DCTHPLGLRD AAMLELMYAC GLRVSELVNL ETRQVDLSAD MVVVFGKGRK ERLVPMGEVA AGRVTQYLQM GRPQILGQRI SAALFVTGRG AAMTRQRFWQ NIERYARSAG ITQTVSPHSL RHAFATHLLN HGADLRSVQL MLGHAALSTT EIYTHVAQAR LKALHAKHHP RG
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