Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2839 |
Symbol | |
ID | 7137102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2522265 |
End bp | 2523971 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643531192 |
Product | glycosyl hydrolase, family 57 |
Protein accession | YP_002427209 |
Protein GI | 218667587 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCGG CGCGTGCGCT TCATGTCATT TTCTGCTGGC ACATGCACCA GCCTGATTAC CGCGATGCCG ACGGCTTCTA CACCCTGCCG TGGACCTACC TGCATGCCTG CAAGGACTAC GCGGATATGG TGGCACATTA TGAGGAGAAC CCCCTCGCCC GGGGAGTGTT CAACTTCGTG CCGATATTGA TCGAGCAGTT GGAGGACTAT ACCGAGCAAT TCCGGAGCGG GCAGTTTCGC GATCCGCTGC TGATTGCACT GGCCACGGGA GACCTCAAGA CACTGCCCAA CGAACAGCGG CATTTCCTTC TGGAGCAATG TTTTCGCCTC GACCACGAGC ACATGCTCAC CCCCTTCCCG CCCTATCGTC GCCTGTATGA GATTTACCAG CTCATATTGG AGGACGTTAA GGAGATGGCG GATTATCTCT CGGTACAATA CATCGCGGAC CTTCTGGTCT GGTACCACCT GGCCTGGACC GGGGAAACCG TGCGCCGCGG CAGTCCCTTT CTCCAGTCAC TGTTCGCCAA AGGCCATGCT TTCAGCCAGG AAGACCGCCG GCAACTGGTG GCGTTTCTCG GCGAACTCAT CGCCGGCCTG ATTCCCCGCT ATCGCGCCTT GGCGGAAGCG GGACGTATCG AAATTTCCAC CACCCCCTAC TACCACCCCA TCGGCCCCCT GCTGCTCGAC TTTGCGGTAG CGCACGAGGC GGTGGCGGAC GCGCCGTTGC CGGACTGTCC GGTCTACCCC GGCGGCACCG AGCGTGCCCG CTGGCACATC GACCGGGCGC AGAATAGCCA TCCCCGGCAT TTCGGGGTAC CGGCGCAGGG CATGTGGCCA GCGGAAGGAG GGGTCTCTGC CGCCTTTGTC GAAATGATGG GCAGCGCCGG CGTGCGCTGG ACGGCCTCCG GTGAAGGCAT ATTGACCCAC AGCCTGCTGC TCGGCAACGA CGACAACGGT CCCCGCGGCC GGGCGGAATA CCTGTACCGC CCCTACCGAC TGCAGGGGCA GGGTCCTGTG ATCTTCTTCC GCGACGATGC CCTCTCCGAC ATCATTGGCT TCGATTACAA AACCTGGTTC GGCCACGATG CAGTCACGGA CTTCATCCAC AAACTGGAGG CGATCTGGCG GCAGACGGAA CATGAGGAAA ACCCCGTTGT CAGCATCATT CTGGATGGCG AGAACGCCTG GGAATACTAT CCCTACAATG GCTACTACTT TCTCTCCGAG CTTTATAAAT CCCTGGCCAA TCACCCCCAC ATCCAGATGT GCACCTTCAG CGACTTCGTC AACCACCATG CCGATGGTAT CCAGAGCATA CCCCATCTGG TCGCTGGGAG CTGGGTCTAC GGCAGCTTCA GCACCTGGAT CGGCGAGGCT GCCAAAAACC GCGCATGGGA CCTGCTCTGC GCCGCCAAAC AGGAGGTGGA TCAGCATATC GGGCAATTTC CTGCGGAGCA GCAGGCGCGC ATCCTCGAAC AGCTTGGCCG CTGTGAGGGC TCCGACTGGT TCTGGTGGCT GGGTGATTAC AATCCCTCGG ACTCGGTCCG CGATTTCGAT CATCTATACC GCCTCAACCT CCGCAAGCTC TACACCCTGA TGCAAATCCC CGCCCCCGAC AACCTCAGCG AGTTCATCAG CCACGGCGGC GGCGCGGCGG AGGCCGGTGG TACCATGCGC CGTACCCACA CCAAGGACCC TGAATGA
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Protein sequence | MPPARALHVI FCWHMHQPDY RDADGFYTLP WTYLHACKDY ADMVAHYEEN PLARGVFNFV PILIEQLEDY TEQFRSGQFR DPLLIALATG DLKTLPNEQR HFLLEQCFRL DHEHMLTPFP PYRRLYEIYQ LILEDVKEMA DYLSVQYIAD LLVWYHLAWT GETVRRGSPF LQSLFAKGHA FSQEDRRQLV AFLGELIAGL IPRYRALAEA GRIEISTTPY YHPIGPLLLD FAVAHEAVAD APLPDCPVYP GGTERARWHI DRAQNSHPRH FGVPAQGMWP AEGGVSAAFV EMMGSAGVRW TASGEGILTH SLLLGNDDNG PRGRAEYLYR PYRLQGQGPV IFFRDDALSD IIGFDYKTWF GHDAVTDFIH KLEAIWRQTE HEENPVVSII LDGENAWEYY PYNGYYFLSE LYKSLANHPH IQMCTFSDFV NHHADGIQSI PHLVAGSWVY GSFSTWIGEA AKNRAWDLLC AAKQEVDQHI GQFPAEQQAR ILEQLGRCEG SDWFWWLGDY NPSDSVRDFD HLYRLNLRKL YTLMQIPAPD NLSEFISHGG GAAEAGGTMR RTHTKDPE
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