| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2832 |
|---|
| Symbol | cysM |
|---|
| ID | 7135333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2515346 |
|---|
| End bp | 2516230 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643531185 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_002427202 |
|---|
| Protein GI | 218667639 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGTC TGGAGAACTG GGTGGGCAAT ACCCCCCTGT GTGAGTTGCG GCGTCTGTCG
CCCCATGCGG GGGTGCGGAT TTTCGGAAAG CTGGAGGGGA ACAACCCCGC CGGTTCGGTC
AAGGATCGTC CCGCCTTGAA CATGATTCGT CGGGCGCTGG AGCGGGGCAC CATCACCCCC
GCTACACGTC TGATCGAACC GACCAGCGGG AATACGGGCA TCGCCCTGGC CATGGCGGCA
TCGGTACGCG GATTGTCCAT GACGCTGATC ATGCCAGACA ATATGAGCAT CGAAAGGCGC
CAGGTGATGC GTGCCTACGG TGCGGAGGTG ATTCTCACCC CTGCGGCCCG GAGTATTGAA
GGTTCCATCG ATCTTGCGCA CCAGATGGTG GCTGCGGGAG AGGGCTTCAT GCTCGACCAG
TTTTCCAACC CTGATAATCC CGAGGCACAT TACCTCGGGA CCGGACCGGA GATCTGGCGC
GATACCCGCG GTACCGTGAC CCATTTCGTA TCGTCCATGG GGACGACGGG GACCATCATG
GGTACCTCTC GCTATTTGCG GGAAGTCTCT CCGGGTATCC AGATCATCGG TGTACAGCCG
ACGGAGGGGG CTAAGATTCC CGGTATCCGC CGTTGGCCGC AAGCCTATCT GCCGCGCATC
TATCATCCCG GGTCTGTGGA CCGGATTGTC GATGTGAGTC AGGAAGAAGC TGAGGAGATG
ACCCGGCGCC TGGCGCGGGA AGAAGGAGTG CTCGCGGGCA TCTCTTCGGG CGGAGCGCTG
GCGGCGGCGA TACGGGTGGC GCAGCATCTG GAGGTTGGCG TGATCGTCGT CATCATCTGC
GATCGGGGTG ACCGCTACCT CTCTACGGGC GTTTTTCCGG CCTGA
|
|---|
| Protein sequence | MGGLENWVGN TPLCELRRLS PHAGVRIFGK LEGNNPAGSV KDRPALNMIR RALERGTITP
ATRLIEPTSG NTGIALAMAA SVRGLSMTLI MPDNMSIERR QVMRAYGAEV ILTPAARSIE
GSIDLAHQMV AAGEGFMLDQ FSNPDNPEAH YLGTGPEIWR DTRGTVTHFV SSMGTTGTIM
GTSRYLREVS PGIQIIGVQP TEGAKIPGIR RWPQAYLPRI YHPGSVDRIV DVSQEEAEEM
TRRLAREEGV LAGISSGGAL AAAIRVAQHL EVGVIVVIIC DRGDRYLSTG VFPA
|
|---|
| |