| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2692 |
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| Symbol | |
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| ID | 7135936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2395736 |
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| End bp | 2397133 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643531048 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002427069 |
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| Protein GI | 218666271 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGC TCAGCAACAA CCTGCGCGGC AGTCTGGCGG AGGCTCGGGA ACGGAACCGC
CAGGCGGCCC TGAAAAAGCT CGAAAACGAG TTTCTGCCGC CATTGCTGGA AATTCAGGAA
CGACCGCCGG CACCCTGGCA GCACTGGATA CTCTGGACAC TGCTGGCGCT GCTCTTCGTC
GCGTTGCTGT GGTCTTATCT GGGCAAGATC AATATCGTGG CAACGGCGAC CGGGCAGTTC
ATCCCCGACG GGCGGGTCAA GGTGGTACAG CCCCTGTCCA CGGCCACCGT CGAACGCATC
TATGTGCATG ACGGCGAGAC GGTGCACAAG GGGCAACTTC TGGTGTCGCT CAATCCGGCG
ATAACCCAGG CGAATCTGCA GGCCACCCAG CAGGAGCTGG CCTTCCGGAA TCTGCAGCAG
GCGCGTATCC ACGCGCAACT GAGCGGGCGA AGCGCCATTG CACCCGCATC GGGCACCAAC
CCTGAATACA TACGGATGGA GAAGGCGTTA CAGGCCGCCC AGGAGGCCGA TTATCAAAGC
CGTCTGCAGG CGGCGCAGTC GCGTGCAGAC CAGAATGCCA CGGCGCTGAA CTCGGCACGG
GCATTGGCCC AGAGTCTGCA GAATCAGGAG GCGCTGTTGC ACCCCCAGGT CGTCGCCGAT
GCCTCTCTTG CGCAAAGCGG CGCCATCCCC CGCATGGAGT ACGAAAATGC GCGGCAAAAG
GAACTTGGCC TGCAAAGCCG GATCGCCCAG AACCAGGGAG ATATCGCTCG TTATCTGCAA
AGGCAGGTGG AATACCGCCA GGACATCGAA GGCATCAAGG CGAACTATCA CGCCACCCTG
TTGCATAGTC TCGGAGAAAA TGCCCAGTCG CTGATTTCGT TGCAGGCGCA ACAAACCCAC
GCCAGCCATG ATTTATCCCT GCACGAATTA CGCTCGCCGG TGGACGGCAT CGTGCAGGAT
CTCGCGGTAC GCAACGTGGG CGAGGTGGTG ACCGCCGCAC AACCGGTCGT CAGTATCGTC
CCCAGCGGTA CACCGCTGGT GGTGGAGGCG TATCTGCCCG ATGCCCACAT GGCTTTCGTG
CATGTCGGTC AGACAGCGCG GGTAAAAGTC TCCGCCTATC CTTTCGAGCA GTACGGCGCC
CTGCAAGGGG TTGTCCAGAA AATCAGCCCC GATGCCGTTT CTCCGAGCGG GTCCGGTAAG
GCCCTGACTG GTGAGGGATT ATCCTACCGG GTGCGCATCA CCGTCCCCCA CCCTTATCTG
ATGGTACATG GGGTTTCCGT GAAAATGCGT CCGGGCATGA CCGTATCCGC CAACATCAAC
ACCGGCAGGC GTCGGATCAT CCAGTTTTTC CTGGGTCCCT TATTCCGCGA CTGGGATGAA
GGACTATCGG TTCGATGA
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| Protein sequence | MGQLSNNLRG SLAEARERNR QAALKKLENE FLPPLLEIQE RPPAPWQHWI LWTLLALLFV
ALLWSYLGKI NIVATATGQF IPDGRVKVVQ PLSTATVERI YVHDGETVHK GQLLVSLNPA
ITQANLQATQ QELAFRNLQQ ARIHAQLSGR SAIAPASGTN PEYIRMEKAL QAAQEADYQS
RLQAAQSRAD QNATALNSAR ALAQSLQNQE ALLHPQVVAD ASLAQSGAIP RMEYENARQK
ELGLQSRIAQ NQGDIARYLQ RQVEYRQDIE GIKANYHATL LHSLGENAQS LISLQAQQTH
ASHDLSLHEL RSPVDGIVQD LAVRNVGEVV TAAQPVVSIV PSGTPLVVEA YLPDAHMAFV
HVGQTARVKV SAYPFEQYGA LQGVVQKISP DAVSPSGSGK ALTGEGLSYR VRITVPHPYL
MVHGVSVKMR PGMTVSANIN TGRRRIIQFF LGPLFRDWDE GLSVR
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