| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2648 |
|---|
| Symbol | |
|---|
| ID | 7134896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 2354638 |
|---|
| End bp | 2355072 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643531004 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002427025 |
|---|
| Protein GI | 218667950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0392684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA ATATTTTCCG CATCCTATGG GTGCTTACCG CCGTGGTGTT GAGCATGGTG
ATAGCGCCGG TCGGCGCAGC GGTGGACCAC CCGCTGCAGC TTGCCATGAA CAATTACAGT
ATGGCCAAAA TGGCTAGTGG TAGCGGAACT TCCGTTTCCG GAAAGAAATA TATAAAAATA
TTATCACCAG CTAACGGTTC AAGAATCAAC GCTAGGACTC CCGTTGTCAT ATCGTATGAC
GTTACCCTGG CCCCTGGCGG AAACCACATT CATTTCTATG TCGACAACCA CTTTAAAGGC
CTTACGCACG AGTTGAAAGG CAGTTTTTCT CTGGGTACCA TGGCTCCTGG GATACATACT
ATTTGCATTA AGGAAGCCAC GGTGGCACAT GTCCTTATTG GGGTAAACCG ATGCATCACC
GTTACAGTGA AGTAA
|
|---|
| Protein sequence | MSQNIFRILW VLTAVVLSMV IAPVGAAVDH PLQLAMNNYS MAKMASGSGT SVSGKKYIKI
LSPANGSRIN ARTPVVISYD VTLAPGGNHI HFYVDNHFKG LTHELKGSFS LGTMAPGIHT
ICIKEATVAH VLIGVNRCIT VTVK
|
|---|
| |