| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2627 |
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| Symbol | nuoD |
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| ID | 7134026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2334168 |
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| End bp | 2335421 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643530983 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_002427005 |
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| Protein GI | 218667952 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAA TCAATAACTT CACCATGAAC TTCGGGCCGC AGCATCCGTC TGCCCACGGT
GTGCTGCGTC TGGTACTGGA ACTGGACGGT GAAGTGATCG AGCGCGCCGA TCCCCACATC
GGTCTGCTGC ACAGGGCTAC CGAGAAGTTG GCGGAAAACA AGACCTATCT GCAGAACCTG
CCTTATATGG ATCGGCTCGA TTATGTGTCG ATGCTGTGCA ACGAACACGC GTACTGTCTG
GCGGTAGAGA AACTGCTCGG CGTTGAAGTG CCGGTTCGTG CCCAGTATAT CCGTACCCTG
TTCGACGAGA TTACCCGCAT TCTCAATCAT CTGCTCTGGT TGGGTGCCTA TGCCCTGGAC
GTCGGTGCCA TGAGCGTCTT TCTTTACTGC TTCCGCGAGC GGGAAGACCT CATGGATGTC
TATGAAGCGG TATCCGGTGC GCGCATGCAT GCCGCCTACT ATCGCCCGGG GGGGGTGTAC
CGCGACCTAC CTGCCCAGAT GCCACAGTAC CAGCCGTCTC CTTACCGTGA CGCCCGGCGC
CTGCAAGAGC TCAATGCCAA CCGTCAGGGC AGCATGCTGG ATTTCATAGA GGACTTCGCG
CGCCGTTTCC CCACCTACGT GGACGAGTAT GAAACCCTGC TGACGGACAA CCGGATCTGG
AAGCAGCGCA CGGTGGGTAT CGGTGTGGTG GGGCCGGAAC GGGCCATTCA ACTGGGCTTC
ACTGGCCCCA TGCTGCGCTC TTCCGGTGTG GCTTGGGATC TGCGGCGTAC CCAACCCTAC
GCAGCGTATG CCGATCTGGA TTTTGATATC CCGGTGGGTA AAACCGGGGA CTGTTATGAT
CGCTATCTGG TCCGCGTCGC GGAGATGCGG CAGAGCAACC GGATCATTGT CCAGTGTGTG
GATTGGCTGC GCAAGAATCC TGGCCCGGTG ATTACCGATG ATTTCAAGAT TGCCGCGCCG
TCCCGCGAAG AGATGAAAAC CAGCATGGAG GCGTTGATTC ATCACTTCAA GCTATTCTCC
GAAGGGATGG CGGTTCCTGC GGGTGAAGTC TATGCCGCGG TGGAGGCTCC CAAGGGGGAA
TTTGGCATTT ATATGATTTC GGATGGTGCC AACAAACCCT ACCGGATGAA AATCCGGGCA
CCCGGATTCC CGCATCTCGC CGCTATGGAC GAGATGGCCC GGGGACATAT GATCGCGGAC
GTGGTGGCTA TTTTGTCCAC CATGGACATT GTTTTTGGCG AGATCGACAG GTAA
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| Protein sequence | MPEINNFTMN FGPQHPSAHG VLRLVLELDG EVIERADPHI GLLHRATEKL AENKTYLQNL
PYMDRLDYVS MLCNEHAYCL AVEKLLGVEV PVRAQYIRTL FDEITRILNH LLWLGAYALD
VGAMSVFLYC FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPAQMPQY QPSPYRDARR
LQELNANRQG SMLDFIEDFA RRFPTYVDEY ETLLTDNRIW KQRTVGIGVV GPERAIQLGF
TGPMLRSSGV AWDLRRTQPY AAYADLDFDI PVGKTGDCYD RYLVRVAEMR QSNRIIVQCV
DWLRKNPGPV ITDDFKIAAP SREEMKTSME ALIHHFKLFS EGMAVPAGEV YAAVEAPKGE
FGIYMISDGA NKPYRMKIRA PGFPHLAAMD EMARGHMIAD VVAILSTMDI VFGEIDR
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