Gene AFE_2614 details

Gene Information

• Locus tag: AFE_2614
• Symbol: thrS
• ID: 7134934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2320436
• End bp: 2322370
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643530970
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002426993
• Protein GI: 218666034
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGATA TCCAGTTGCC GGACGGTAGT CATCGTCAGT TTGCGGAGCC CGTGACCGGG 
CTGACGCTGG CGCGAGCGAT CGGCAGCGGC CTCGCTAGGG CGGCGGTAGC CATGCGGGTC 
GACGGCATCC TCAAGGATCT TTCGGCGGTG CTGGATCAGG ATGCGGAAGT GGCGATTGTC 
ACCCGCGACA GCGCAGATGG TCTGGAGGTG ATCCGCCATT CCACCGCGCA TTTGCTGGCG 
CAGGCGGTGC AGTCCCTCTA TCCGGAGGCT CAGGTCACCA TCGGGCCGGT CATCGATAAC 
GGTTTCTACT ATGACTTTGC TTTTCCGCGT GGCTTCACGC CAGAAGATCT GGAAGCGATC 
GAAGCGCGGA TGCACGCACT GGTCAAAGAA AATCTTCCGG TGCAACGCGA GATGCTCTCC 
CGCGAAGATG CCATCGCTCT GTTTGAAAAG ATGGGCGAAG ACTACAAGGT CGAAATTATC 
CGCGCCATTC CCCGAGGTGA ACCACTGAGC CTGTATCGGC AGGGGGATTT CGTGGACCTG 
TGCCGCGGTC CCCATGTGCC ATCGACTGGC GTTCTCGGGG CATTCAAATT GCAGCGAGTG 
GCGGGCGCCT ATTGGCGCGG GGATTCCCGC AATCCCATGT TGCAGCGTAT TTATGGCACG 
GCCTGGGCGC AGCAGAAAGA CCTTGACGCC TATCTCCAGC AACTGGCGGA GGCCGAAAAG 
CGGGATCACC GGCGTATCGG CACTGAACTG GAGCTCTTCT CCATTCAGGA AGATGCCGGT 
GGCGGCCTGG TGTTCTGGCA TCCCATGGGC TCGCGCGTGC GACGCGTCAT CGAGGATTTT 
TGGAAGGAGG CCCACGTGGA GGCAGGTTAC GATCTGCTCT ATACGCCGCA TATTGCCCAT 
GAGCAGCTGT GGTATACCTC GGGGCACAAG GATTTCTACA GTGAGTCCAT GTTCGACCCG 
ATGCAGGACG AGGGGCAGGC CTACCAGCTC AAACCCATGA ACTGTCCATT CCATATTCTC 
ATTTATAAGG ACAAGCTGCA TTCCTACCGG GACCTGCCGA TTCGCTGGGC GGAACTGGGT 
ACGGTTTACC GCCACGAAAT GTCGGGTGCC CTGCACGGAC TGATGCGGGT GCGGGGCTTT 
ACCCAGGATG ATGCCCACGT CTTTTGTCGA CCCGACCAGA TAGAGGCAGA AATCGGTGCG 
GTGCTGGTAC TGGTGCGAAA AATTCTCGGC ACCTTCGGCT TCGACCAGTA TGAAATCAAT 
CTGTCCACCC GTCCCGGGCA TTCGGTGGGC AGTGACGAGA TCTGGGATGC CGCCACCCAG 
GCCCTGCGCA ATGCCCTGGA GCGTGCGGGC CTGGAATATC AGGTGGATGC AGGTGGTGGC 
GCGTTCTACG GACCTAAAAT CGATCTGAAG ATTCAGGACG CCATCGGTCG TAAGTGGCAA 
TGCAGCACCG TGCAGCTCGA CTTCAATCTG CCGGAGCGCT TCGCCATGGA ATATGTGGCG 
GAAGACGGTG CGCGCAAGGT GCCCATCATG GTGCATCGCG CCATCTTCGG TTCCATCGAA 
CGCTTCTTCG GTGTACTCAT CGAGCACTAT GAGGGCAAGT TTCCAGTCTG GCTCGCTCCG 
GTACAGGCCG TGGTGCTGCC TATCAGCGAG CATTACTCGG AATACGCCGA GTCGGTAAGT 
GACGTATTGG TGAAACGCGG CATTCGGGCA GAAACGGACT TGAGAAACGA GAAGATAGGT 
TATAAGATAC GCGCCCATAC TTTGCGTAGG GTGCCCTACC TGCTGGTGGT CGGGGAACGG 
GAAAAAGAAG CGGGTACGGT GGCGGTGCGG GATCGAAATG GCCAGGATCT CGGCACGCTT 
TCCATAGACG CCGTGGGCGC TACCCTGCAG AAAATGGACC AGGCGCGGGT GAATACCCTG 
GAGTGGCAAG GCTAG 

 

Protein sequence

MPDIQLPDGS HRQFAEPVTG LTLARAIGSG LARAAVAMRV DGILKDLSAV LDQDAEVAIV 
TRDSADGLEV IRHSTAHLLA QAVQSLYPEA QVTIGPVIDN GFYYDFAFPR GFTPEDLEAI 
EARMHALVKE NLPVQREMLS REDAIALFEK MGEDYKVEII RAIPRGEPLS LYRQGDFVDL 
CRGPHVPSTG VLGAFKLQRV AGAYWRGDSR NPMLQRIYGT AWAQQKDLDA YLQQLAEAEK 
RDHRRIGTEL ELFSIQEDAG GGLVFWHPMG SRVRRVIEDF WKEAHVEAGY DLLYTPHIAH 
EQLWYTSGHK DFYSESMFDP MQDEGQAYQL KPMNCPFHIL IYKDKLHSYR DLPIRWAELG 
TVYRHEMSGA LHGLMRVRGF TQDDAHVFCR PDQIEAEIGA VLVLVRKILG TFGFDQYEIN 
LSTRPGHSVG SDEIWDAATQ ALRNALERAG LEYQVDAGGG AFYGPKIDLK IQDAIGRKWQ 
CSTVQLDFNL PERFAMEYVA EDGARKVPIM VHRAIFGSIE RFFGVLIEHY EGKFPVWLAP 
VQAVVLPISE HYSEYAESVS DVLVKRGIRA ETDLRNEKIG YKIRAHTLRR VPYLLVVGER 
EKEAGTVAVR DRNGQDLGTL SIDAVGATLQ KMDQARVNTL EWQG