Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2565 |
Symbol | mrdA |
ID | 7134533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2279201 |
End bp | 2281009 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643530921 |
Product | penicillin-binding protein 2 |
Protein accession | YP_002426945 |
Protein GI | 218667340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCAG TACAGCCCGC CCGGGAACAT CGACAATTCA CCCGCCGACT GCTGGTCGCT GCGGGACTGA TCACGGCGCT TACGGCGCTG CTGGCCATAC AGATATTCCG GCTGCAGGTC TGGGATCACG ATCTCTATGC CACCCAATCC ACCCATAACA CCCTTGTGCT GTTGCCCATC GCCCCCCAGC GAGGTCTGAT TCTTGACCGG CATGGGCAGG TACTCGCCGA TGATCAGACC GGCTTCGCCC TTACGATCAC GCCGAACAAA GCCATGCACC CGGAGGAAAC CATCCGGCGC CTACGGCGGA TATTGCCCGT CAGTGCAGAG GACCAGCAAC GCTTCAACCG TGATCTATCC CATGCACGTC CCTATCAGCC CATTCTTCTG CGTCGCAATC TGAGTCCCGG AGAGTTGGCC GCATTTGCCG TGCAGCGACA TCAATTTCCG GGGGTAGCCA TACAAACCAG GACCAAACGC CACTATCCCT ATGGTTCACT GTTCGCCCAT GCAGTGGGCT ATGTGGGCCG CCTGACCCCT GCGGAAATCC GCGAGGAGCA GATGGCGGAC TACGCGGGGC TGGACAGCAT CGGCAAAAGC GGCCTTGAAG CACAGTATGA AACCCTGCTG AAAGGACAGC CGGGCGACCA AGAGGTAGAG GTCGATGCAC GCGGGCATAC CTTACACACA CGCTTGCGCA ACCCGCCCCG GGAGGGCGTA ACCATTCGGA CGACTCTGGA TCTTGCGGTG CAGCAGGCCG CTGCCAAGGC CATGATAGGC CAGCAGGGCG CCGTAGTGGC ACTGGATCCG CGCAATGGTG ACGTACTCGC CGCTTATTCG GCCCCCGCAT TCGATCCGAA TGCTTTCGTA GATGGCCTGA GTACCGCTGT ATGGAGCAGC CTGCGGGACG ATCCTGGCAC GCCCATGGCC AACCGCTTTC TGCGGGGCAG CTATCCTCCG GGCTCTACCA TCAAACCTTT TGTGGCACTC AGCGCCCTGC GCGACAAGGC CATCGCCGCT GATCAGCGGC TCGCTGGCGG CGCTTACTAC CAGATTCCCG GTACCAAACA CAAATATTAC GACTGGAAAC CCGGTGGTCA TGGTGCGCAA AATCTGCGCG AAGCCATTCG CGATTCCAAT GACGTATATT TTTACCAGAT TGCCATGCGT CTTGGCGTAA TCCAGCTCGG CAACGGTCTC GCGCATTTTG GCTTTGGTCA GCGCAGTGGA GTGGATTTAC CCGGGGAAGC CGCCGGGGTG ATCCCCTCCC CGGTCTGGCT ACGTCGGCGC TATGGCCAGA CTTGGTATCA GGGACAAACC GTGATGATGG GAATAGGACA GGGTTATCTG CTGAGCACCC CGCTCCAGTT GGCGCGGGCC ACAGCCAGCA TCGCCAATGG TGGCAAACTG GTTATACCGC ATATGAAACA ATCACCCGAC GGTGCGACGC AACCCCTGGA TTTTTCGCCA GAGGACATCG CCGTCATTCA GGGTGCGATG CGTGATGCGG TGACTTCAGG TACCGGCAAA TCACTGGCCA ACGATCTCCA TGCCATTGCC GGCAAAACCG GCACTGCCCA GGTGCATCAT GCGCAGCGCA ATGATTCCGG TCGGGTGCTG CGCGATACGG TTCAACTTTG GCAGGATCAC GCGCTCTTCA TCGCCTACGC TCCGGCTGAC CATCCGCGCA TCGCCGTGGC GGTAGTGGTC GAACATGGCG GCCATGGAGG CAGCACTGCC GGGCCTGTCG CGAGAGCGGT TATCGACGCC TACCTCAATA CATTGACGAC AGCGGAGGTC AATTCATGA
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Protein sequence | MNAVQPAREH RQFTRRLLVA AGLITALTAL LAIQIFRLQV WDHDLYATQS THNTLVLLPI APQRGLILDR HGQVLADDQT GFALTITPNK AMHPEETIRR LRRILPVSAE DQQRFNRDLS HARPYQPILL RRNLSPGELA AFAVQRHQFP GVAIQTRTKR HYPYGSLFAH AVGYVGRLTP AEIREEQMAD YAGLDSIGKS GLEAQYETLL KGQPGDQEVE VDARGHTLHT RLRNPPREGV TIRTTLDLAV QQAAAKAMIG QQGAVVALDP RNGDVLAAYS APAFDPNAFV DGLSTAVWSS LRDDPGTPMA NRFLRGSYPP GSTIKPFVAL SALRDKAIAA DQRLAGGAYY QIPGTKHKYY DWKPGGHGAQ NLREAIRDSN DVYFYQIAMR LGVIQLGNGL AHFGFGQRSG VDLPGEAAGV IPSPVWLRRR YGQTWYQGQT VMMGIGQGYL LSTPLQLARA TASIANGGKL VIPHMKQSPD GATQPLDFSP EDIAVIQGAM RDAVTSGTGK SLANDLHAIA GKTGTAQVHH AQRNDSGRVL RDTVQLWQDH ALFIAYAPAD HPRIAVAVVV EHGGHGGSTA GPVARAVIDA YLNTLTTAEV NS
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