| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2482 |
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| Symbol | cga |
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| ID | 7135439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2214225 |
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| End bp | 2216270 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530840 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_002426864 |
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| Protein GI | 218665170 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.40631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC TTCCGTTCGG GCAGCCAGGC CTGCCCAGCA CTTGGGCCAG TGCCCACAAG
CAGGCTGTGG GCACTGCCTT GAGTGAACGT TCCCGCGTCT GGTTCACCGT CGCCGACGGT
GTGTTAACCG AGGTTTATCA TCCGACGATC GACTGTCCGA ATCAACGCGA TCTTCAGTTC
CTGATCACCG ATGGTGGTGA GCTATTTCAC GAAGAGCGAC GCGATCTGGA ACATAGCGTC
GAGTGGATCG AAGACGGCAT TCCGGCCTTC CAGATTGTCA GCCGAGATCC GCAAGGCCGC
TACCGACTGA TCAAGACGGT CTGCACGGAT CCCGATGCCG ACTGCGTGCT TGAGCGAGTC
CACTTCGAGC CTTTGGTGGA AGCAGCCCGA CATTACCGCC TGTATCTGCT GTGGGCGCCC
CATCTCGACA ACCAGGGGTC GGATAACCAC GGTCGCGTTG AATATGGCGC CAACGAATGC
GACTGGCTCA TCGCCTGGCG CGGGTCTCGA TACGCTGCGG TAACCGCCAC GGTACCCTTC
TCACGCATGT CAGCCGGCTA TGTGGGTCAT TCCGACGGCT GGCAGGATAT AAACAGACAC
CGGCACCTAG AATGGAACTT CACGACAGCG GGACCGGGCA ATATTGCGCT GACGGCAGAA
CTGGAGTTGC CGCCAGACGG TCATTTCATG CTTTGTGTCG GGTTCGGCAA CAGCGAGCGG
ACGGCCATCA AGGCTGCAAG CGGCTGCCTG GACCGCAACG GATTCGCGTC GGTTCTCAAT
CGCTACATGG AAGGGTGGCG CGCTTATCAG CGCGGATTGC TCGATCTGTC GGCCCAGAGC
GGCGACGGCG GGCAGCTTTA CCGGCGTAGC ATCGCGGTGT TGCGTACGCA TATCGACAAG
ATTCATCGCG GCGCGGGCGT GGCCTCGTTG TCCATTCCCT GGGGCGAATC GGCATCGGCG
GACCAGCCGA TTGGCGGCTA TCACTTGGTC TGGCCGCGCG ATCTCTACCA CCAGGCCATG
GGCTTGCTCG CCGCCGGCGA CCGGGAGAGG CCAGCGCAGA TTCTGCATTA TTTGTTCTCT
CGACAGCGCG AGGATGGAAG CTTCTTTCAG AATTTCTGGG TGGATGGCAG GCCCTACTGG
CAAGGCCTGC AGCTCGACGA AGTCGGCTAT TCGGTGCTGT TGGCCAACCA CCTGCACCAC
GAAGGGCTCT TGGACTTCGA CCCGTATCCC GTGGTACAGC GTGCCGCCGA TTTCCTGGTG
AACCATGGGC CGGTCACCCC CCAGGACCGC TGGGAGGAGA ACAGAGGTTA CAGTCCCCAT
ACCCTGGCGG TAGTGGTTGC CGCGCTGCGC GCTGCGGCAG CGGTGGCCGA TGCGACCGGA
AAAGGGGCGC AGGCCGTCAC TTACCGACAG GTGGCGCAAG ACTGGGAACA ACGCATCGAG
GATTGGACCT TCACCGATTG CGGTCGATTG CTCTTCGGCC ATCCCGAGCA CTACGAGCGT
ATCGCCCTGA TCCCGTCGGT CGACACCGGT GAGCATCTGC CAGAGTGTCG AGTATTTCTG
CCAATTCGCA ATCTACCAGC GGAAGCAATG TACAACCAGT CCCAATGTTG CGTGGTAGAC
GGCGGTTTCC TGGAGTTGGT ACGCCTGGGT CTGCGCACCG CCGCCGACCT GCACGTTCTC
AAGACCCTGC CGGTATGGGA TGCACTGTGC CGACGCGAGA CGCCTTGCGG ACCGGCGTGG
TATCGCTACA ACGGGGATGG TTACGGTGAG CACGAGGACG GTTCACCATT CGATGGTACC
GGGCGCGGAC GCTTGTGGCC GTTGCTCACC GGCGAGCGCG GACACTATGA AGTTGCCGCC
GGACGCGACT CCCGGCCCTA CATCAAGGCG CTGGAGTGCT TTGCCAACGA AAACGGCATG
CTGCCCGAGC AAGTGTGGGA TACAGAACCG CGTCTGGGCC ATGGCACGGG TTCGGCCACA
CCTCTGGTGT GGGCTCACGC GGAGTATATC CGGCTGCTGG GCGCTTCGAG TCGTAAAGGA
ACATGA
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| Protein sequence | MSELPFGQPG LPSTWASAHK QAVGTALSER SRVWFTVADG VLTEVYHPTI DCPNQRDLQF
LITDGGELFH EERRDLEHSV EWIEDGIPAF QIVSRDPQGR YRLIKTVCTD PDADCVLERV
HFEPLVEAAR HYRLYLLWAP HLDNQGSDNH GRVEYGANEC DWLIAWRGSR YAAVTATVPF
SRMSAGYVGH SDGWQDINRH RHLEWNFTTA GPGNIALTAE LELPPDGHFM LCVGFGNSER
TAIKAASGCL DRNGFASVLN RYMEGWRAYQ RGLLDLSAQS GDGGQLYRRS IAVLRTHIDK
IHRGAGVASL SIPWGESASA DQPIGGYHLV WPRDLYHQAM GLLAAGDRER PAQILHYLFS
RQREDGSFFQ NFWVDGRPYW QGLQLDEVGY SVLLANHLHH EGLLDFDPYP VVQRAADFLV
NHGPVTPQDR WEENRGYSPH TLAVVVAALR AAAAVADATG KGAQAVTYRQ VAQDWEQRIE
DWTFTDCGRL LFGHPEHYER IALIPSVDTG EHLPECRVFL PIRNLPAEAM YNQSQCCVVD
GGFLELVRLG LRTAADLHVL KTLPVWDALC RRETPCGPAW YRYNGDGYGE HEDGSPFDGT
GRGRLWPLLT GERGHYEVAA GRDSRPYIKA LECFANENGM LPEQVWDTEP RLGHGTGSAT
PLVWAHAEYI RLLGASSRKG T
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