Gene AFE_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2431 
Symbol 
ID7134583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2172992 
End bp2176105 
Gene Length3114 bp 
Protein Length1037 aa 
Translation table11 
GC content63% 
IMG OID643530793 
Productheavy metal efflux pump, CzcA family 
Protein accessionYP_002426817 
Protein GI218665832 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTTA GGGCGATCAT GCGTTGGTGT ATGGAAAACC GCTTGCTGGT CATGATTGCT 
GTCTTGGTGT TGACCGTCGC CGGTACGCTG GCGGTGATCA ATATTCCCCT GGAGGCCATC
CCCGACATCT CGCCCACCCA GGTCATCATC AAGACCTCCT ATCCGGGCCA GGCTCCGCAG
ATCGTTCAGG ATCAGGTGAC CTATCCCCTG GAGACCACCC TGCAGGAGGT GCCCGGCGCC
CAAGCCGTGC GCGGCTACTC GATGTTCGGG GATTCCTATG TCTACGTCCT CTTCAAGGGT
GGCACCAGCA TCTATCAGGC CCGTAATCTG GTACTCCAAT ACCTGAGCCA GGTGCAGTCC
AAGCTGCCGC CGGGGATCAC GCCGGCCCTT GGCCCCAACA GTTCGGGGGT GGACTGGATC
TTCGAGTATG CCCTCACCGA TCCCAGCGGA ACTTTGAATC TGGCCCAACT CACCACCTTG
CAGAACTGGT TCCTCAAGTA CGAACTGCAG GGCATCTCCG GCGTCGCCGA GGTGGCGACG
GTGGGGGGGA TGGTGCAAGA GTACCAAGTG GTGGTGAACC CCCAGAAACT CCTCGCCTAC
AACCTGACCC TGCCGGAGGT GGAGGCCGCC ATCCGCGCCG CGAACGGGGA GACCAGCGGC
TCGGTGGTGG ATATGGGGGA AGCGAGTTAT ATCGTCCGTA CCTCGGGTTA CATCCATTCC
CTGAAAGCCC TGGAGGATGC TTCGCTGGGG GTGCGCAACG GCGTGCCCAT TACACTGCGG
GAGGTGGCCC GTGTGCAGTT GGGGCCGCAG TTGCCCAACG GGATTGCCGA GCTCAACGGC
CACGGACAGG TGGTGGGCGG GATCGTCATG ATGAACCAGG GCGGCAACGC CTACGCCCTC
ATCCACCAGA TCGAGCGCAA GCTGAAGGAA ATCCAGCCCT CCCTGCCCAA GGGCGTGAAG
GTTGTCACCA CCTACAGCCA AGCTCCGCTC ATCCAGCGCA GTATCCATAC CCTGACCGGT
AAGCTGCTGG AAGAATCCCT GGCGGTGGCG CTCATCTCCC TGCTCTTTCT GCTGCGTGCA
CGTTCGGCGC TGGTGGCGCT CATCGCCCTG CCGCTGGGGA TACTGGCCGC CTTTTTCATC
ATGTGGTCTC TGGGGATCCC CGCCAACATC ATGTCCCTGG GCGGCATCGC CATCGCCATC
GGCGTGATGA TGGATGCCCC CGTGGTCATG ATCGAGAATA TGCACAAGCA TTTAGAACAC
AACCCCGGCG TCGACCCTTG GGCGGCGGCC ATAGCGGCGG CGGAGGAGGT CGGTCCGGCA
CTGTTCTTCT CGCTGATCAT CATCGCCGTT TCCTTCCTGC CGGTCTTCGC CCTGGGCGGC
GAGGAAGGCA AGCTCTTCGC GCCCCTCGCC TTCACCAAGA CATTTTCCGT GGCCGCCGCC
GCCATGCTCT CGGTAACCCT GGTGCCCATC CTCATGGCTT GGTTCATTCG CGGCCGCATC
CTCCCCGAAA GCAAAAACCC CCTGAATCGG GTCCTGGCTT TCCTCTACCG ACCGGTCATC
CACGGTGTCC TGCGCGCTCC CTGGATCATT TTGGTCCTCG CCCTGCTGCT CACGGCCACC
CTCTACTACC CCTGGAATCG CCTGGGGTCG GAATTTATGC CACCCCTGAA CGAGGGGACG
CTGCTCTACA TGCCGGTCAC CCAGGATCCG GCAGTCTCCA TCGGCCAGGC GGCCGCGCTC
CTGCAGCAAA CGGACCGCAT CCTGAAGACC TTCCCCGAGG TGGAGACGGT TTTCGGCGAG
GCCGGAAGGG CACAAACGGC GACCGATCAA TCGCCCCTGT CCATGTTTGA TACGGTGGTG
AATTTGAAAA ATCCCGACCA GTGGCCAGCC GGGATGACCA TGCACAAGCT GCAAAGCAAG
ATGAACAAAG CCTTGCAAGT CCCCGGCCTG TCGAATATCT GGACGCAGCC GCTCAAAGGA
CGGGTGGATA TGCTGACTAC CGGTCTCCAG ACGCCATTAG GCATTAAAAT CGGCGGAACG
GATCTCGATA CCCTGAACCG CCTGGGGCAG GACCTCCAAA CGGTTTTGCG CAAGGTCCCT
GGGACCCAAA GCGCCTATGC GGCCCGCGTC ACCGGTGGCC GCTACATCGT CGTGCACACC
GACCGCGCCA AGGCCGCCCG CTACGGTCTT TCGGTGGCGG ATGTGAACCG TCTGGTGGAG
ACGGCGATCG GCGGCGAGAT CCTGACCACT GCGGTGCAAG GGCTGGAGCG CTTCCCGGTG
GATCTCCGTT ACCCCCGGGA ACTGCGCCAG TCCCTGGCCA CCCTGATGGA AAGCCGCATC
GCCGCTCCCG ACGGCGCCCA GATCCCTTTG GCCCAGGTGG CCGACCTCCG CATCGAGGGA
GGGCCAGCCA TGCTCACTAG CGACAACAGT CGGCTGAACA GTTGGATCTA CATTGACCTG
AAGCCCGGCA CCAACATCGG TGCTTATGTG CCCCGCGCCA AGGCGGCGAT TGCGAAAGCC
GTCCGTCTCC CAGGAGGTTA TACCGTCTCC TGGGTAGGCC AGTATCAGGT CATGGAGCAG
GCCGCCAAGC GCCTGGAGCT GGTCATTCCC GCCGTCATTC TGCTGATCGC CCTGCTCCTC
TACTTCAACT TCAAAAACTG GGTGGAGGTG ACCATCATCC TGCTCACCCT GCCCCTGTCC
CTGGTCGGCG GTTTCTGGCT CGTCTACTGG CTCGGCTACA AACTCTCGGT GGCCGTGGCC
GTGGGCTTCA TCGCCCTGGC GGGGGTGGCG GCAGAATTCG GGGTGGTGAT GCTCCTCTAC
CTGGATCAGG CCCTCATCCG GCGGCAGGCC CGCGACACCT TGCAGAGTTG GCATGATCTT
CAGCTTGCCG TCATCGAGGG GACCATGCTG CGTCTGCGGC CTCTGGCCAT GACCTTGACC
CTGGTGGTGG GTGGCCTCTT GCCCATCATG TTCAGCCATG GCGCCGGTGC CGATGTGATG
AAGCGTATTG CCGCCCCCAT GGTGGGCGGC ATGTTCAGCG CCGCGTTACT GGCGCTGCTG
GTGATCCCCG CCCTCTACGC CCTGTGGCAG AAACGGCGAT TGGGCCTGCG GTGA
 
Protein sequence
MSVRAIMRWC MENRLLVMIA VLVLTVAGTL AVINIPLEAI PDISPTQVII KTSYPGQAPQ 
IVQDQVTYPL ETTLQEVPGA QAVRGYSMFG DSYVYVLFKG GTSIYQARNL VLQYLSQVQS
KLPPGITPAL GPNSSGVDWI FEYALTDPSG TLNLAQLTTL QNWFLKYELQ GISGVAEVAT
VGGMVQEYQV VVNPQKLLAY NLTLPEVEAA IRAANGETSG SVVDMGEASY IVRTSGYIHS
LKALEDASLG VRNGVPITLR EVARVQLGPQ LPNGIAELNG HGQVVGGIVM MNQGGNAYAL
IHQIERKLKE IQPSLPKGVK VVTTYSQAPL IQRSIHTLTG KLLEESLAVA LISLLFLLRA
RSALVALIAL PLGILAAFFI MWSLGIPANI MSLGGIAIAI GVMMDAPVVM IENMHKHLEH
NPGVDPWAAA IAAAEEVGPA LFFSLIIIAV SFLPVFALGG EEGKLFAPLA FTKTFSVAAA
AMLSVTLVPI LMAWFIRGRI LPESKNPLNR VLAFLYRPVI HGVLRAPWII LVLALLLTAT
LYYPWNRLGS EFMPPLNEGT LLYMPVTQDP AVSIGQAAAL LQQTDRILKT FPEVETVFGE
AGRAQTATDQ SPLSMFDTVV NLKNPDQWPA GMTMHKLQSK MNKALQVPGL SNIWTQPLKG
RVDMLTTGLQ TPLGIKIGGT DLDTLNRLGQ DLQTVLRKVP GTQSAYAARV TGGRYIVVHT
DRAKAARYGL SVADVNRLVE TAIGGEILTT AVQGLERFPV DLRYPRELRQ SLATLMESRI
AAPDGAQIPL AQVADLRIEG GPAMLTSDNS RLNSWIYIDL KPGTNIGAYV PRAKAAIAKA
VRLPGGYTVS WVGQYQVMEQ AAKRLELVIP AVILLIALLL YFNFKNWVEV TIILLTLPLS
LVGGFWLVYW LGYKLSVAVA VGFIALAGVA AEFGVVMLLY LDQALIRRQA RDTLQSWHDL
QLAVIEGTML RLRPLAMTLT LVVGGLLPIM FSHGAGADVM KRIAAPMVGG MFSAALLALL
VIPALYALWQ KRRLGLR