Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2431 |
Symbol | |
ID | 7134583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2172992 |
End bp | 2176105 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643530793 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_002426817 |
Protein GI | 218665832 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTTA GGGCGATCAT GCGTTGGTGT ATGGAAAACC GCTTGCTGGT CATGATTGCT GTCTTGGTGT TGACCGTCGC CGGTACGCTG GCGGTGATCA ATATTCCCCT GGAGGCCATC CCCGACATCT CGCCCACCCA GGTCATCATC AAGACCTCCT ATCCGGGCCA GGCTCCGCAG ATCGTTCAGG ATCAGGTGAC CTATCCCCTG GAGACCACCC TGCAGGAGGT GCCCGGCGCC CAAGCCGTGC GCGGCTACTC GATGTTCGGG GATTCCTATG TCTACGTCCT CTTCAAGGGT GGCACCAGCA TCTATCAGGC CCGTAATCTG GTACTCCAAT ACCTGAGCCA GGTGCAGTCC AAGCTGCCGC CGGGGATCAC GCCGGCCCTT GGCCCCAACA GTTCGGGGGT GGACTGGATC TTCGAGTATG CCCTCACCGA TCCCAGCGGA ACTTTGAATC TGGCCCAACT CACCACCTTG CAGAACTGGT TCCTCAAGTA CGAACTGCAG GGCATCTCCG GCGTCGCCGA GGTGGCGACG GTGGGGGGGA TGGTGCAAGA GTACCAAGTG GTGGTGAACC CCCAGAAACT CCTCGCCTAC AACCTGACCC TGCCGGAGGT GGAGGCCGCC ATCCGCGCCG CGAACGGGGA GACCAGCGGC TCGGTGGTGG ATATGGGGGA AGCGAGTTAT ATCGTCCGTA CCTCGGGTTA CATCCATTCC CTGAAAGCCC TGGAGGATGC TTCGCTGGGG GTGCGCAACG GCGTGCCCAT TACACTGCGG GAGGTGGCCC GTGTGCAGTT GGGGCCGCAG TTGCCCAACG GGATTGCCGA GCTCAACGGC CACGGACAGG TGGTGGGCGG GATCGTCATG ATGAACCAGG GCGGCAACGC CTACGCCCTC ATCCACCAGA TCGAGCGCAA GCTGAAGGAA ATCCAGCCCT CCCTGCCCAA GGGCGTGAAG GTTGTCACCA CCTACAGCCA AGCTCCGCTC ATCCAGCGCA GTATCCATAC CCTGACCGGT AAGCTGCTGG AAGAATCCCT GGCGGTGGCG CTCATCTCCC TGCTCTTTCT GCTGCGTGCA CGTTCGGCGC TGGTGGCGCT CATCGCCCTG CCGCTGGGGA TACTGGCCGC CTTTTTCATC ATGTGGTCTC TGGGGATCCC CGCCAACATC ATGTCCCTGG GCGGCATCGC CATCGCCATC GGCGTGATGA TGGATGCCCC CGTGGTCATG ATCGAGAATA TGCACAAGCA TTTAGAACAC AACCCCGGCG TCGACCCTTG GGCGGCGGCC ATAGCGGCGG CGGAGGAGGT CGGTCCGGCA CTGTTCTTCT CGCTGATCAT CATCGCCGTT TCCTTCCTGC CGGTCTTCGC CCTGGGCGGC GAGGAAGGCA AGCTCTTCGC GCCCCTCGCC TTCACCAAGA CATTTTCCGT GGCCGCCGCC GCCATGCTCT CGGTAACCCT GGTGCCCATC CTCATGGCTT GGTTCATTCG CGGCCGCATC CTCCCCGAAA GCAAAAACCC CCTGAATCGG GTCCTGGCTT TCCTCTACCG ACCGGTCATC CACGGTGTCC TGCGCGCTCC CTGGATCATT TTGGTCCTCG CCCTGCTGCT CACGGCCACC CTCTACTACC CCTGGAATCG CCTGGGGTCG GAATTTATGC CACCCCTGAA CGAGGGGACG CTGCTCTACA TGCCGGTCAC CCAGGATCCG GCAGTCTCCA TCGGCCAGGC GGCCGCGCTC CTGCAGCAAA CGGACCGCAT CCTGAAGACC TTCCCCGAGG TGGAGACGGT TTTCGGCGAG GCCGGAAGGG CACAAACGGC GACCGATCAA TCGCCCCTGT CCATGTTTGA TACGGTGGTG AATTTGAAAA ATCCCGACCA GTGGCCAGCC GGGATGACCA TGCACAAGCT GCAAAGCAAG ATGAACAAAG CCTTGCAAGT CCCCGGCCTG TCGAATATCT GGACGCAGCC GCTCAAAGGA CGGGTGGATA TGCTGACTAC CGGTCTCCAG ACGCCATTAG GCATTAAAAT CGGCGGAACG GATCTCGATA CCCTGAACCG CCTGGGGCAG GACCTCCAAA CGGTTTTGCG CAAGGTCCCT GGGACCCAAA GCGCCTATGC GGCCCGCGTC ACCGGTGGCC GCTACATCGT CGTGCACACC GACCGCGCCA AGGCCGCCCG CTACGGTCTT TCGGTGGCGG ATGTGAACCG TCTGGTGGAG ACGGCGATCG GCGGCGAGAT CCTGACCACT GCGGTGCAAG GGCTGGAGCG CTTCCCGGTG GATCTCCGTT ACCCCCGGGA ACTGCGCCAG TCCCTGGCCA CCCTGATGGA AAGCCGCATC GCCGCTCCCG ACGGCGCCCA GATCCCTTTG GCCCAGGTGG CCGACCTCCG CATCGAGGGA GGGCCAGCCA TGCTCACTAG CGACAACAGT CGGCTGAACA GTTGGATCTA CATTGACCTG AAGCCCGGCA CCAACATCGG TGCTTATGTG CCCCGCGCCA AGGCGGCGAT TGCGAAAGCC GTCCGTCTCC CAGGAGGTTA TACCGTCTCC TGGGTAGGCC AGTATCAGGT CATGGAGCAG GCCGCCAAGC GCCTGGAGCT GGTCATTCCC GCCGTCATTC TGCTGATCGC CCTGCTCCTC TACTTCAACT TCAAAAACTG GGTGGAGGTG ACCATCATCC TGCTCACCCT GCCCCTGTCC CTGGTCGGCG GTTTCTGGCT CGTCTACTGG CTCGGCTACA AACTCTCGGT GGCCGTGGCC GTGGGCTTCA TCGCCCTGGC GGGGGTGGCG GCAGAATTCG GGGTGGTGAT GCTCCTCTAC CTGGATCAGG CCCTCATCCG GCGGCAGGCC CGCGACACCT TGCAGAGTTG GCATGATCTT CAGCTTGCCG TCATCGAGGG GACCATGCTG CGTCTGCGGC CTCTGGCCAT GACCTTGACC CTGGTGGTGG GTGGCCTCTT GCCCATCATG TTCAGCCATG GCGCCGGTGC CGATGTGATG AAGCGTATTG CCGCCCCCAT GGTGGGCGGC ATGTTCAGCG CCGCGTTACT GGCGCTGCTG GTGATCCCCG CCCTCTACGC CCTGTGGCAG AAACGGCGAT TGGGCCTGCG GTGA
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Protein sequence | MSVRAIMRWC MENRLLVMIA VLVLTVAGTL AVINIPLEAI PDISPTQVII KTSYPGQAPQ IVQDQVTYPL ETTLQEVPGA QAVRGYSMFG DSYVYVLFKG GTSIYQARNL VLQYLSQVQS KLPPGITPAL GPNSSGVDWI FEYALTDPSG TLNLAQLTTL QNWFLKYELQ GISGVAEVAT VGGMVQEYQV VVNPQKLLAY NLTLPEVEAA IRAANGETSG SVVDMGEASY IVRTSGYIHS LKALEDASLG VRNGVPITLR EVARVQLGPQ LPNGIAELNG HGQVVGGIVM MNQGGNAYAL IHQIERKLKE IQPSLPKGVK VVTTYSQAPL IQRSIHTLTG KLLEESLAVA LISLLFLLRA RSALVALIAL PLGILAAFFI MWSLGIPANI MSLGGIAIAI GVMMDAPVVM IENMHKHLEH NPGVDPWAAA IAAAEEVGPA LFFSLIIIAV SFLPVFALGG EEGKLFAPLA FTKTFSVAAA AMLSVTLVPI LMAWFIRGRI LPESKNPLNR VLAFLYRPVI HGVLRAPWII LVLALLLTAT LYYPWNRLGS EFMPPLNEGT LLYMPVTQDP AVSIGQAAAL LQQTDRILKT FPEVETVFGE AGRAQTATDQ SPLSMFDTVV NLKNPDQWPA GMTMHKLQSK MNKALQVPGL SNIWTQPLKG RVDMLTTGLQ TPLGIKIGGT DLDTLNRLGQ DLQTVLRKVP GTQSAYAARV TGGRYIVVHT DRAKAARYGL SVADVNRLVE TAIGGEILTT AVQGLERFPV DLRYPRELRQ SLATLMESRI AAPDGAQIPL AQVADLRIEG GPAMLTSDNS RLNSWIYIDL KPGTNIGAYV PRAKAAIAKA VRLPGGYTVS WVGQYQVMEQ AAKRLELVIP AVILLIALLL YFNFKNWVEV TIILLTLPLS LVGGFWLVYW LGYKLSVAVA VGFIALAGVA AEFGVVMLLY LDQALIRRQA RDTLQSWHDL QLAVIEGTML RLRPLAMTLT LVVGGLLPIM FSHGAGADVM KRIAAPMVGG MFSAALLALL VIPALYALWQ KRRLGLR
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