Gene AFE_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2380 
Symbol 
ID7135458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2126416 
End bp2127030 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID643530745 
Producthypothetical protein 
Protein accessionYP_002426769 
Protein GI218667090 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC AGCCGCTGGC TGAAGCCACT TTGCTTGCGC GCATCGCCCT GGGCGAGCAC 
ACCCGCCAGC AGTTCAAACG CAGCTTCCAC AACCCTGATG CCCTGGCCGC CGAGCTGGCT
GCCTTTGCCA ACAGCGGCGG CGGCACGCTG CTGATCGGTG TGACCGATGA CGGCATCATC
ACTGGCCTGA GCGAGCACGC CTTCCGGATG CTGCCCTACC GGGGACTGGG CAGTGGTATC
CCCCGTGCGC TGGATGAATG GTCGCAGATC GAACTGATCG ACGAAGTTAG CGGCAACCAA
TTCACCGCTC GGGTGCAACG GCCCAAGGCG CAGTGGGCGG GGGCGGGCGA ACAAGCCACC
GAACAAGTCG AGGCCCCAGT CACCGAACAA GTAACCGAAC AAGTTCGCCG ACTGTGCGTG
GCTCTGGGGC AAGAGGCCAA AGGAACGAAG GAGCTGATGC AGTCGCTCAA CCTCAAACAC
CGCCCGAGCT TTTTGGAAGA CTATCTGAAC CCGGCCCTCC AACAGCGTTT TGTGGAACTG
ACCCAGCCAG ACTCACCGCG CAGCCCCACA CAAAAATACC GCCTGACCGC ACAAGGAAAG
GTCTTGTTGA AATGA
 
Protein sequence
MSEQPLAEAT LLARIALGEH TRQQFKRSFH NPDALAAELA AFANSGGGTL LIGVTDDGII 
TGLSEHAFRM LPYRGLGSGI PRALDEWSQI ELIDEVSGNQ FTARVQRPKA QWAGAGEQAT
EQVEAPVTEQ VTEQVRRLCV ALGQEAKGTK ELMQSLNLKH RPSFLEDYLN PALQQRFVEL
TQPDSPRSPT QKYRLTAQGK VLLK