| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2358 |
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| Symbol | dapA |
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| ID | 7135524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2106030 |
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| End bp | 2106905 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530723 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_002426749 |
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| Protein GI | 218665345 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.592923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCATG GCAGTATGGT AGCTTTGGTG ACGCCCATGC AGGTGGACGG GGCAATAGAT
GATGTTGCAC TTCGCGAACT CGTGGAGTGG CACATCGCCG AAGGGACGCA CGCGCTGGTC
GCCGTCGGCA CTACCGGAGA ATCCGCCACC CTCGAAATGA GGGAACATGT GGCGGTGATC
CAGACGGTGG TGGAACAGGC CAGGGGGCGC GTTCCGGTGA TCGCCGGGAC CGGGGCCAAC
GCGACCCATG AGGCCATAGA GCTCACCCGT GCGGCCATGG AAGTCAAGGC CGATGCAGCG
CTGCTGGTTT CCCCCTATTA CAACAAGCCT ACCCAGGAAG GACTGTTCCA ACACTATTCG
GCGATCGCTG AGCACTGCCA TTTCCCCATC ATTCTCTACA ATGTTCCTGG TCGCACTGCC
GGTGATATTT TACCGGAGAC GGTGGCGCGC CTGGCGCCGC GTGCGGATAT CATCGGCATC
AAGGAAGCAA GCGGCAAAGT CGAACGGGTC GCCGAAATTC TGGCCTTGTG CGGGGATCAG
GTGCAGGTTT ACAGCGGTGA TGATGGTGCC GCCCTTGCAG CCATGGCGTT GGGTGCTCGC
GGCGTGATCT CCGTTACCGC CAACGCAGCG CCCCGACTGA TGGCGCGGAT GTGTGACCTG
GCACTGGCTG GAGACTTTGT GGGCGCCCGT GCGGTCAACG CGCAATTGAC AGGATTACAC
CGGGATCTCT TTTTGGAGTC CAATCCCATC CCGGTCAAAT GGGCGCTGCA CGAAATGGGC
CGCATGGAGT CCGTTCTGCG CCTGCCCCTG ACCACCCTTT CGTCCGTTCA TCATGAGCGT
CTGCGCGAAA GTTTGCGCCG GGCGCAGTGT ATCTGA
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| Protein sequence | MFHGSMVALV TPMQVDGAID DVALRELVEW HIAEGTHALV AVGTTGESAT LEMREHVAVI
QTVVEQARGR VPVIAGTGAN ATHEAIELTR AAMEVKADAA LLVSPYYNKP TQEGLFQHYS
AIAEHCHFPI ILYNVPGRTA GDILPETVAR LAPRADIIGI KEASGKVERV AEILALCGDQ
VQVYSGDDGA ALAAMALGAR GVISVTANAA PRLMARMCDL ALAGDFVGAR AVNAQLTGLH
RDLFLESNPI PVKWALHEMG RMESVLRLPL TTLSSVHHER LRESLRRAQC I
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