Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2253 |
Symbol | |
ID | 7136551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2001409 |
End bp | 2006118 |
Gene Length | 4710 bp |
Protein Length | 1569 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643530621 |
Product | hypothetical protein |
Protein accession | YP_002426651 |
Protein GI | 218667157 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGAAG CCATGTACCG CACTTATCCC GCGGATGCGC GGATTGCCGC CGATTTGAAA AAAACGGTCA TGACCTATGG CTTCCAGGTG CAAAGTGTGA CCCCGGATGC CAACCAGTTC CCAACCCGCA CCTGCGTGAA GTTTACCGCC CCGCTCTCCG AGGCACCGGA TTTTCATGCC AGTAACTGGG TAACCTTTTC CCCCGTCCGG CCCCATGCGG CGGTGGTCCG TGAGAACGGC GGCATCTGCG TCACCGGTCT GCCTGCGGGC AGCAGCACGC AGACGCATAT CCGGGCAGGC CTGCCCGCCA TTGCCGGAGC GGTCATGACG GCGGCGAAAA GCATTACGTT GACCCTGCCC AATCGCTCAC CAAGCATCAT CTCCGATACC GGCCGCTTTA TCATTCCGGC ATCACTGCCA CCGGCGGTAG GTTTTTCCAG CGTCAATATT TCACGGGTCA AACTGCAGAT CAATCGGGTG CCGGAACGCG CCCTGCTGGC TTTCGTCGCC AATCACCCGT TGCTGAATCA GGACAGCGAC GAATCCACCC TGAACAACCA GAACAGCCTG ACGGTCTGGC GCGGAACGGC AGACATCCCG CATTTCACGC AGAACCAGTT GATGCACACG ATATTGCCCC TGCCCAAAAT CCTTCAGAAG CCGGGGCTCT ACGCGATCCA GATCGGCCCC GGAGACGGCA CGCCCAATGC CAACGGCAGC CTCAACACCG TGCAACTGGT GTTGCGCACC AACCTGGCAC CGACAGTCTG GCAGGGGCGT AATGGCTTGT ATGTGCAGAT GCGCCGTTAT ACCGACGCCA GCCCCTGGAG CGGCGTCAAA GTCGAACTCA TCGCCCAGGA CAACGATATC CTGCAAACGG TGCGGACCAA CAGCGACGGC ATCGCCGTCT TTCCGAAACC CATCCTGCAG GGCAGCGGCG GACAGAGTCC AGCGGCGCTG CATATTTATG GTCCCGGTAA CGAGTTCACC CTCTTTAACC TGCAGGGATC GCCGCTGAAT CTGTCCGGAC GCGGCATCTC CGGGCGAACG GCCCTGAAAC CGGTCAGCCC TTTCCTGTGG CTGGACCGCG GTATTTATCG TCCCGGCGAG ACGGTGCATG TGGCGGCCCT TTATCGCAGT GCTGCCGGCA GACCGCTGGA CTTGCCTTTG CACCTCATCG TCCGCCGGCC CGGCGGGCAG GTTTTCCTGG ACACTGTCCC CAAACTGTCT GACGACGACG CCATCGCCGT GCCCGTCAAA CTGCCCTTGG CGGCGCAGGA TGGTAACTGG AGCGTGAGCC TGGCCACCGG CGTACGTGAG TCCGCTCTGG CGAAGGAGAC CTTTACGGTA TCCGCCTTTG TACCGCCGAC CCTGGCCGTC GAGCTAGGCA ACGCCAAGGC CATTCCGGCG GGCCAACAGG TGCAGTGGCC GGTACATGTG CGTTATCTCT ATGGTGCCCC CGGCGCCCAT CTGTCGGGCA CAGCGCGGAT CAGCCTGAGC AACGGCTCTA CCCCTTATCC GCAATGGCAG CACTACCATT TCGGCCTGCA TGGCGAGGTG TTTACGGCAC CGGTGCAAGA GCCCACGTTG CCGGAAACCG ACGCCACGGG CCTCACTCAA GTACCCATTG ACCTGAAGAA AATACCGGAC AGCACCCGTT TTCTGGAGGC GCATGTGGCG GTCTCCATCA ACGAGCCCTC CGGCCGCCCG GTGAACAGTC GCATCATTCT GCCCGTCACG CCGGATCATC CCCTCATCGG CATCGAAAAC GGCTTCCGGG ATGAAACCGT AACCGCGGGG AAATTACCGG TTTTTCACAT CGCGGCGGTA GCCCCCGATG GCAAGGCCAA GGTCATGCCG GTGCAGATCC AGGTGGTCCG GCAGTCTTCC GAGTGGAATA TCTCCCTACA TAATGGAGTG GCCAGTTGGG GCTATACCTA TATCAACCAT CCGGTGCTGA CCAAGGATGT AACCTTGCCA GCCGGTCAAC CATATGCCCT GCAATTACCC GTGCTGGATT ATGGCCGTTA CCGCCTGCGA GTGATTGAAG CCCACGGCGG CCTGGCCGCC AGTTCGGTGA TTTTTTACTC CGGCTGGCAG ACCAGCGGCA ATCCGGGGGC GCCCCAGCGG GTTTCCGTGC GCAGCGGTGC GGCGGAATAT GCCGCGGGCA GCACGGCCGA TATCCATGTC TCCGCGCCCT TCTCCGGCCC GGCGGTACTG GTCATCGCCA ATGACAAGAT TTTAAAGGTG AAGAACTTTA CCCTGCCCAA AGGGGGCCGC ACCCTGCATG TGCAGGTCCG GAAGGGCTGG GGCGCGGGCG CCTATGCGCT GGTGGATGTG TTCCGCCCTG CCAGTGCTAC CGAGGCCCCG GAACGAGCCA TCGGTCTGAC TTGGCTCGGC CTCCAGCCGG GCCGCCGTGC CATTCCGGTC CGCTTTGCCG TCGATCCGGT ATACCGCCCA CGGCAGACCA TCCGGATTCC GGTGAAAACC CGCCCCGGCG CCTATGTGAC GCTGGCGGCG GTCGATAAAG GCATCCTCAA CCTCACCCAG TTCCCCAATC CCAACCCCCT GCGCCACTTC TTTGGCAAGC GGCGGCTGGA TATCAGCGTC TTTGACGACT ACGGCGCCCT GCTGGCCCGC CCCACGGGTT TTGAAGCCCT GCTGCAAAAC GGCGCAGGGG CCAATTTCGG CCCGGCGGCG CGACCCATTC CGCAGAAGGT GGTGGCGCTC TTCGCCGGCC CGGTGCAGGC CAACCGTGAT GGCATCGCCG AACTGCCCCT CACGATGCCG GAGTTCAACG GCGAACTCCA CCTCATGGCC GTGACCTGGA AGGGCGACGC GGTCGGTGCC GGCGACACCA ACATCATCAT TCGTAACCGC CTCATCGCCA ACCTGCTGCT GCCGCGCTTC CTGTCTCCCG GCGACAGCGT CCAGGCTACG GTCATGTTGC AGAACCTGAA GCTGCCAGCG GGCATATATC ACAGTCAGGT CACGGCGACC GGGCCAATCC GCGTCGGGAG CAATGGCAGT AGTGCGGCAT CCCTGAAACC GCAAGCCATG CGTCTGCTGC CGGTGACCCT GGCAGGCACC GGAGAGGGCA TGGCGCACCT GACCCTGACC GTCACGGGTC CGGATGGTTA CCGCCTGGTT CGCCACTGGA ATATGGTGGT GCACTCCACG CAGCCGCCCG TTTCCAAAAA CCATAATCTG ACGCTGGCGG CGGGCGACCA CCAGGCACTA CAGCCGGATA CCCAGGGCTT TATCCCCGGT TCCACCGTGA GCTCGGTGAC ACTCGGCAAT ACCATGCCCT TCAACCCCAA GGCCTATGTA CAGGCCCTTT ACCAAGGTTG GCACGGTGGT TCCCTGCTGA ATGCCGCCAG CAAAGGTTTC CCGCTGACGG TGTTGAAGCC GCCGCTGATT ACGCCCCGGC GTGCCGCCAA ACTCCAGGAT TACGTCAATC AGGTGCTGAA TGATCAGCGC TATGACGGGG CCTTCGGCCT GTGGTCCAAT AATGGTGACG CCCAACCCTG GCTTACGGCC TTTGCCACCG AATTCCTCCT CCGCGCACAA AAGGCCGGGG CCACGGTGCC GCAACCGACC ATCGATCAAG CCTTGCACTG GTTGGGTCAG GAAGTCGAAA ACGAAAATCA CACCGTCTTT GACCGCATCT ACGCCGTTTA TGACCTGAGC CTGGCGGGCA AACCTCCGGC GGGGGCCATC CGTATGCTGG CACGGCACAT GAACCAGATC AGCATGCCCT TGGCGCTGGC ACAACTGGGT TCGGCCCTCA ACACCATCGG CGAACCGCAC CAGGCGCTAA AAGCCCTGCG GAAGGCCATC AAAACGCAAG AGCCGGTCGG CGGCGACTGG TGGTGGGGGC GTTCCGACTG GGATGCGGCC TTTGGCTCGC CGCTGCGCGA CGCCTGGGCC GTGCCCGCCA TCATCGCGCA GACCGGTTTG ATGCCCGATG CCGTGACCAA GTTGCGGCAG GACCTCCCCG GCGCAGGATT GGAACCCGAC GACCTGACCA CCCAGGAACT GGCTTGGGCG CTCTACGCCG ATGGCGTGCT GGGCGGCGCG GGTCAGACCG TCCATGGCCA ATGGGGCAAC CAGGTCATTC AGCGGTCAGG GCCCGTGGTC CTGCCCCTGA CCGGACCCGT AACGCTACGC AATCTAGGTG ACGAAATCCT CCCCGTTTCG CTGGCGACCA CAGGCATTAC GCTGACGCCG CCGCCCGCCG CCGCCCACGG AATGGAGGTC AGCCGGGCTT TTTATACGCT GGCTGGTAAA CCGTTGAAGC CGGAATCCCT TCCACAAAAC ACCGTCTTCG TAGTCGTGTT GAAAGGGGCG ATCACCGACA ACCTGCCCCA TCGCGCACTG CTCGATATGG GTTTGCCGCC GGGCTGGGAA CTGGCCGGCA GCGTAACGCC GGGCAAGGTC CATGGCCTGT CCTGGCTGCA TCATCTGACG GCGCCGGAAG CCACGGCCGC CACCGATGAT CGCTACGAAG CGGCCTTTCG GATGGCCCCC AAAAACAATG ACGCGTTCAA CGGCAATGGG GTTCCAGACT TCAAGACGGC CATCCTGCTG CGCGCCGTCA CCCCCGGTCA GTACGTCCTG CCGGGGGTCA CCGTCAGCGA CCTCTTTCAC CCGTCCATAT TCGCGCGCAC GACCGGGCGG AAGGTGGCCG TGACACCGCC GGCCTCCTGA
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Protein sequence | MLEAMYRTYP ADARIAADLK KTVMTYGFQV QSVTPDANQF PTRTCVKFTA PLSEAPDFHA SNWVTFSPVR PHAAVVRENG GICVTGLPAG SSTQTHIRAG LPAIAGAVMT AAKSITLTLP NRSPSIISDT GRFIIPASLP PAVGFSSVNI SRVKLQINRV PERALLAFVA NHPLLNQDSD ESTLNNQNSL TVWRGTADIP HFTQNQLMHT ILPLPKILQK PGLYAIQIGP GDGTPNANGS LNTVQLVLRT NLAPTVWQGR NGLYVQMRRY TDASPWSGVK VELIAQDNDI LQTVRTNSDG IAVFPKPILQ GSGGQSPAAL HIYGPGNEFT LFNLQGSPLN LSGRGISGRT ALKPVSPFLW LDRGIYRPGE TVHVAALYRS AAGRPLDLPL HLIVRRPGGQ VFLDTVPKLS DDDAIAVPVK LPLAAQDGNW SVSLATGVRE SALAKETFTV SAFVPPTLAV ELGNAKAIPA GQQVQWPVHV RYLYGAPGAH LSGTARISLS NGSTPYPQWQ HYHFGLHGEV FTAPVQEPTL PETDATGLTQ VPIDLKKIPD STRFLEAHVA VSINEPSGRP VNSRIILPVT PDHPLIGIEN GFRDETVTAG KLPVFHIAAV APDGKAKVMP VQIQVVRQSS EWNISLHNGV ASWGYTYINH PVLTKDVTLP AGQPYALQLP VLDYGRYRLR VIEAHGGLAA SSVIFYSGWQ TSGNPGAPQR VSVRSGAAEY AAGSTADIHV SAPFSGPAVL VIANDKILKV KNFTLPKGGR TLHVQVRKGW GAGAYALVDV FRPASATEAP ERAIGLTWLG LQPGRRAIPV RFAVDPVYRP RQTIRIPVKT RPGAYVTLAA VDKGILNLTQ FPNPNPLRHF FGKRRLDISV FDDYGALLAR PTGFEALLQN GAGANFGPAA RPIPQKVVAL FAGPVQANRD GIAELPLTMP EFNGELHLMA VTWKGDAVGA GDTNIIIRNR LIANLLLPRF LSPGDSVQAT VMLQNLKLPA GIYHSQVTAT GPIRVGSNGS SAASLKPQAM RLLPVTLAGT GEGMAHLTLT VTGPDGYRLV RHWNMVVHST QPPVSKNHNL TLAAGDHQAL QPDTQGFIPG STVSSVTLGN TMPFNPKAYV QALYQGWHGG SLLNAASKGF PLTVLKPPLI TPRRAAKLQD YVNQVLNDQR YDGAFGLWSN NGDAQPWLTA FATEFLLRAQ KAGATVPQPT IDQALHWLGQ EVENENHTVF DRIYAVYDLS LAGKPPAGAI RMLARHMNQI SMPLALAQLG SALNTIGEPH QALKALRKAI KTQEPVGGDW WWGRSDWDAA FGSPLRDAWA VPAIIAQTGL MPDAVTKLRQ DLPGAGLEPD DLTTQELAWA LYADGVLGGA GQTVHGQWGN QVIQRSGPVV LPLTGPVTLR NLGDEILPVS LATTGITLTP PPAAAHGMEV SRAFYTLAGK PLKPESLPQN TVFVVVLKGA ITDNLPHRAL LDMGLPPGWE LAGSVTPGKV HGLSWLHHLT APEATAATDD RYEAAFRMAP KNNDAFNGNG VPDFKTAILL RAVTPGQYVL PGVTVSDLFH PSIFARTTGR KVAVTPPAS
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