| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2219 |
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| Symbol | rluC |
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| ID | 7135049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1967311 |
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| End bp | 1968264 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643530587 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_002426617 |
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| Protein GI | 218668096 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.654666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAAA ACGGGGTGCG ACAATGGCAG GTGACCGACG CGGAAGCCGG GCAGAGGCTG
GATAACTTCC TCTTGCGGGT GATGAAAGGT GTGCCGCGCT CCCATATCTA CAAAATCCTG
CGCAGCGGCG AAGTTCGGGT GAACAAGGGG CGGGCGCGAC CGCACTACCA CCTGGCAGAG
GGCGACGTGC TGCGACTGCC GCCGGTGCGG GTGGCGGCGC CCAGCGATCC CGCCGTACTG
CCAGCCTACC TGCAGGGCCA GTTGGAAGCC GCTGTCCTTT ACGAAGACTC CCATCTGCTG
GTGCTGGACA AGCCCAGCGG GCTGGCCGTG CATGGGGGAT CGGGCTTGAG CTGGGGCGTC
ATCGAAGCAT TGCGCCAGTT GCGGCCCGAT GCCCGTGAAC TGGAGCTGGT ACATCGCCTG
GACCGCGACA CCTCCGGCTG TCTGATATTC AGCAAGAAAC GCTCGGCGCT GCGTGCGCTC
CATGAAGCCC TGCGGGCAGG CCTCATGGAG AAACGTTATC TGGTGCTGGC GGCCGGTGAC
TGGCAGGGCG AAGCGCGTTC CGTGCGTCTG GCCCTGCGCA AGAACACCCT GCAGTCCGGC
GAGCGCATGG TGCGGGTGGA CCCAGTGGAG GGTAAGGCCG CACATACACA TTTCCTGCCA
CTGGAACGTT TCCGCGGCGC GGTGCTGTTG CAGGCGGACC TCGATACCGG GCGTACGCAC
CAGATTCGGG TTCACCTGCA AGCGATTGGG CATGCGGTGG CAGGCGATGA GAAATACGGC
GATGCGGCCT TCAACCAGCG TCTGCGCGCC CTGGGCCTGC GGCGACTTTT TTTGCACGCG
GCCCTGGTGG CCTTCCGCCA CCCGCAGGAC GGCCGGCCCA TGCGCATCGA GGCCCCGCTG
CCTGCTGATC TGCAAGCCAT TCTCACCCCA CTGCGTAAGG AGTCTGCCGG ATGA
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| Protein sequence | MAENGVRQWQ VTDAEAGQRL DNFLLRVMKG VPRSHIYKIL RSGEVRVNKG RARPHYHLAE
GDVLRLPPVR VAAPSDPAVL PAYLQGQLEA AVLYEDSHLL VLDKPSGLAV HGGSGLSWGV
IEALRQLRPD ARELELVHRL DRDTSGCLIF SKKRSALRAL HEALRAGLME KRYLVLAAGD
WQGEARSVRL ALRKNTLQSG ERMVRVDPVE GKAAHTHFLP LERFRGAVLL QADLDTGRTH
QIRVHLQAIG HAVAGDEKYG DAAFNQRLRA LGLRRLFLHA ALVAFRHPQD GRPMRIEAPL
PADLQAILTP LRKESAG
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