Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2152 |
Symbol | hyfF |
ID | 7134189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1903172 |
End bp | 1904626 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643530520 |
Product | hydrogenase 4 subunit F |
Protein accession | YP_002426551 |
Protein GI | 218666660 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.915264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATTC TGCTGGTTCT GGCTTGTGCG GCGATGGGCA TCCCCCTGCT TGCCCTCTGG GGCGACGGAC GCCGGGGGGC AGCGCTGTTC ATCGGCTTCA ATACGCTGAC GCTGCTGGCC ATCCTGGCCC TGGCCATACA GGTGGTGAAA GACGGCGCAT TTACCGCGGG CGGCGGACAA TTCATGGTGG ATGATCTCAG TATCGTGCTG GTACTGGTGG ATGGCGTGGT GGGGCTCAGT ACGGCGTGGT TCTCCCGCAA CTATATGCTG CACGAAACGG TGCACTGGTC GCTCTCCCGC CAGCGTGTCC GCCTGTATCA CGCCATGTTC CAGACCTTTC TCGCCACCAT GTTGCTGGCC CTGCTGACCA ACAATATGGG CATCCTCTGG GTGGCCATGG AAGGCGCCAC CCTGTCCACG GTACTGCTGG TGAGCCTCTT CCGCACCGCT GAGGGCCTGG AGGCGGCCTG GAAGTATTTC ATTCTCTGCG GTGTCGGACT GGCGATGGCG CTATTCGGTA CCATCCTGCT GTATTTCGCC GCCCAGAAAA TCATGGGGCA TGGTGCGGAC GCATTGTTGT GGACGCATCT GGCGGCCGTG CGCCATGAGT TGGAACCGCA GGTCATGGCC ATCGCCTTCA TCTTCATGCT GGTGGGCTAC GGAACCAAAA TCGGCTTGAC CCCACTCAAC AACTGGCTGC CGGATGCTCA CGCCAGCGGC CCCAGTTCGG TTTCGGCGGT GCTCTCCGGC CTGTTGCTCA ATGTCGCCCT CTACGCCATC CTGCGCGCCA AGGTACTGGT GGATGGCGCT CTGGGTCGGG ACTTCGCCAG CCACCTGCTG ATGGGTTTCG GTTTGCTCTC CCTGCTGGTG GCAGGCTTTT CCATGCTACG GCAACGGGAT GTAAAGCGGC TTTTCGCCTA TTCCTCCATC GAGCATATGG GGCTGGCCAC CTTCGCCTTC GGGATCGGCG GACCACTAGC GAGCTTTGCC GGCTTGCTGC ACATGGTCAG CCACAGCCTG ACCAAGTCCT CGGTGTTTTT CTCGATCGGG CAAGCGGTAC AGGACATCGG CAGCCGCGAA ATCCAGCGCA TCCGCGGTAT GCTGGAATTC AGCCCCTTGC TGGGCTGGGC GTTCATGCTG GCGGTACTGT CCATCCTGGG AATGCCCCCC AGCGGGCTCT TCTTGAGCGA ATTCCTGATC ATCACCAGTA CCCTGCAGGC CCAACCCTGG CTCACGCCCC TGCTCCTGCT GGGGTTGGGT GTGGCGTTCG CCGGGATTTT CCCGCGCATG CAGGGCATGG TCTTCGGGGC GCATCAGGAA GGCGTTGCGC GCCAGTCCGT CGTCGGCATC ATTCCGGTCT TCGTCCAATT GACCCTCGTC GCCATGCTCG GGGTGTTCAT CCCCTTGACG CTGGTCCAGT GGATGCAGCA CGCCGCCCAG ATTCTCCACG GATAG
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Protein sequence | MLILLVLACA AMGIPLLALW GDGRRGAALF IGFNTLTLLA ILALAIQVVK DGAFTAGGGQ FMVDDLSIVL VLVDGVVGLS TAWFSRNYML HETVHWSLSR QRVRLYHAMF QTFLATMLLA LLTNNMGILW VAMEGATLST VLLVSLFRTA EGLEAAWKYF ILCGVGLAMA LFGTILLYFA AQKIMGHGAD ALLWTHLAAV RHELEPQVMA IAFIFMLVGY GTKIGLTPLN NWLPDAHASG PSSVSAVLSG LLLNVALYAI LRAKVLVDGA LGRDFASHLL MGFGLLSLLV AGFSMLRQRD VKRLFAYSSI EHMGLATFAF GIGGPLASFA GLLHMVSHSL TKSSVFFSIG QAVQDIGSRE IQRIRGMLEF SPLLGWAFML AVLSILGMPP SGLFLSEFLI ITSTLQAQPW LTPLLLLGLG VAFAGIFPRM QGMVFGAHQE GVARQSVVGI IPVFVQLTLV AMLGVFIPLT LVQWMQHAAQ ILHG
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