Gene AFE_2147 details

Gene Information

• Locus tag: AFE_2147
• Symbol: ychF
• ID: 7136053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1897882
• End bp: 1898973
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643530515
• Product: GTP-binding protein YchF
• Protein accession: YP_002426546
• Protein GI: 218668057
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTGG CCTGCGGCAT CGTCGGCTTA CCCAACGTCG GCAAATCCAC CCTTTTCAAC 
GCCATCACCA AGGCGGGCAT CGCGGCGGAG AACTATCCCT TCTGTACGAT CGAGCCCAAT 
GTCGGGCTGG TTGCCGTGCC GGATCCCCGT CTTGAGGCCC TGTCAGAGAT CGTCAAGCCA 
CAGAAGGTAC AGCACGCCAC CATGGAGTTC GTGGACATCG CCGGGCTGGT GGCCGGCGCA 
GCGCAGGGCG AGGGTCTGGG CAACCAGTTT CTCGCCCATA TCCGCGAGAC AGACGCCATT 
GCCTTGGTCA CCCGCTGCTT TGAGGACCCC AACGTGGTTC ATGTGAGCGG TCACGTGGAT 
CCCGTGGCAG ATCTCGAGGT GGTGCTGACG GAACTGATTC TGGCCGATCT CGGCACCGTG 
GAGAAAGCCC AGGCACGGGT GGCGCGACAG GCCAAGGGCG GCAACAAGGA TGCGGTGGCC 
GAAGCCGCCG CCATGGCCCG CCTCCTGCCC CATCTGAATG AAGGAAAGCC AGCCGCCAGT 
CTGAACCTGA ACAGTGAGGA GCAAGAGCAT CTGCGCAGCC TCTGTCTGCT GACCATGAAA 
CCCCTCATGG TTATTGCCAA TGTCGCTGAG GACGAGCTGC AGGGGGGCCC CTGGCGTGCA 
CCACTGGAAG CCTGGGCGAC CGAACGGCAT GCGAGTGTGG TGCCTGTCTG CGCCGCCATA 
GAATCAGAGC TGGCAGAACT GGAACCGGAG GAGCAAAACG CTTTCTTGCA GGACTTGGGG 
CTGGAGGAGC CCGGCCTCAA CCGCATCATC CGTGCGGCTT ACCGTTTACT GGGTCTGCAG 
ACCTACTTCA CTGCCGGCGT CAAGGAGGTC CGCGCCTGGA CCATCCCGGT GGGCGCCACA 
GCGCCACAGG CGGCGGGCGT GATCCACAGC GATTTCGAAC GCGGTTTCAT CCGCGCCCAG 
ACCATCGCCT ATGACGATTT TATCCGGTAC AAAGGCGAAC AGGGGGCGAA GGAGGCGGGC 
AAGATGCGCG CGGAAGGAAA GGAATATGTG GTGCAGGACG GAGATGTGCT GAACTTTTTG 
TTCAACGTGT AG 

 

Protein sequence

MALACGIVGL PNVGKSTLFN AITKAGIAAE NYPFCTIEPN VGLVAVPDPR LEALSEIVKP 
QKVQHATMEF VDIAGLVAGA AQGEGLGNQF LAHIRETDAI ALVTRCFEDP NVVHVSGHVD 
PVADLEVVLT ELILADLGTV EKAQARVARQ AKGGNKDAVA EAAAMARLLP HLNEGKPAAS 
LNLNSEEQEH LRSLCLLTMK PLMVIANVAE DELQGGPWRA PLEAWATERH ASVVPVCAAI 
ESELAELEPE EQNAFLQDLG LEEPGLNRII RAAYRLLGLQ TYFTAGVKEV RAWTIPVGAT 
APQAAGVIHS DFERGFIRAQ TIAYDDFIRY KGEQGAKEAG KMRAEGKEYV VQDGDVLNFL 
FNV