| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2125 |
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| Symbol | |
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| ID | 7137173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1879314 |
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| End bp | 1880357 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643530494 |
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| Product | phytoene/squalene synthetase family protein |
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| Protein accession | YP_002426526 |
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| Protein GI | 218665783 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATGG CGGCGTTGGA GCGGGCTTTG GCGTACCAGG CACAAAGCCT TCAGGTTGTT
TCCAGAACTT TTGCCCTGAC CATCCCCCAG TTGCCGGAAG CGCTCCGGGA CGCAGTCGGT
AACGGTTATC TGTTGTGCCG CATTGCCGAC ACCATTGAAG ACGATCCGGA TATGCCCTGG
GAAAAAAAAG CCTGTTGGCA GGCCAAATTT CTTCAGGTCG TGGAGGGTGC GGACGATCCC
GCCGCCTTTG CTGCCGCATT GGGCGCAGAC CTGTCGCCGG AGATGCCCGA AGCCGAGCAC
GATCTGATTC GCCACACTCC GGAAGTCGTC GCCATCACCC ACAGCCTCAA CCCCACCCAG
CAGGCGGCAT TGTCCCGCTG CGTGCGGATC ATGGGAATGG GGATGGCGGA GTTTCAGCAG
CATGCTTCGT TGCAGGGGTT GGCGGACATG GCGGCCCTGG ATCGCTACTG CTATGTGGTT
GCGGGTGTCG TCGGTGAAAT GCTCACCAGC CTATTTGTCG AGTTCGAGCC GCTGCTGGCG
GAGCATGATG CGGAGATGCA GCGTTTGGCG GTGTCCTTCG GGCAGGGCCT GCAGATGACC
AATATTCTCA AGGACATCTG GGATGACTGG CAGCGCGGTG TGAGCTGGAT GCCACGCGCG
CTGTTTCAGC GTCATGGCTG CGATATCGCG GGGGTGCGGC CCGGCAGTCG GGACCCCGCG
TTCCAGGCGG GCCTCACCGA GCTGCTGGGT ATTGCCGCGA ACCATCTGCA AAATGCGCTG
CGCTATACGC TGCTGATACC GGCCGGGCAG ACGGGGATGC GGGATTTTTG CCTCTGGGCC
ATCGCTATGG CGGTGCTGAC CCTGCGGCGG ATTGCCGAAA ATCCGGCCTT TGCCTCCGGA
AGCGAGGTGA AAATCAGCCG CCGCAGCGTA CATCGGGTGG TATTTCTGTC GCGTCTCCTG
CATCGCTCCG ATGCGCTCCT GCAGTGGAGT TTCCGGGTGG GCGTCAAACC ACTGCCTTTG
CCTTCCGCTG TCGCGCAACC ATGA
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| Protein sequence | MLMAALERAL AYQAQSLQVV SRTFALTIPQ LPEALRDAVG NGYLLCRIAD TIEDDPDMPW
EKKACWQAKF LQVVEGADDP AAFAAALGAD LSPEMPEAEH DLIRHTPEVV AITHSLNPTQ
QAALSRCVRI MGMGMAEFQQ HASLQGLADM AALDRYCYVV AGVVGEMLTS LFVEFEPLLA
EHDAEMQRLA VSFGQGLQMT NILKDIWDDW QRGVSWMPRA LFQRHGCDIA GVRPGSRDPA
FQAGLTELLG IAANHLQNAL RYTLLIPAGQ TGMRDFCLWA IAMAVLTLRR IAENPAFASG
SEVKISRRSV HRVVFLSRLL HRSDALLQWS FRVGVKPLPL PSAVAQP
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