Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2122 |
Symbol | |
ID | 7136856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1875705 |
End bp | 1876694 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643530491 |
Product | hypothetical protein |
Protein accession | YP_002426523 |
Protein GI | 218667725 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.744824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCCC TGTTGACCGG GGCATCTGGT TTCGTCGGTG GCGCGGTGCT GCGCCGCCTG CTCGCCGAAG GTCTGGAGAT ACGAGTGCTC CACCGCACCG GCGCTGATCC GGCCAACTGG GAAGGGCTGG ACGTGGAGCT GGTGGTCGGG GATCTCACAG ACGGCCCGGC TCTGGACAGC GCGGTGGCTG GCTGTCAGGC GGTTTTTCAT GTGGCTGCGG ACTACCGGCT CTGGGTGCCC GATCCGCGCG CCATGTATGC CGCCAATGTG GGCGGCAGCG AACGTCTGGT GCGCGCGGCG CTCGATGCCG GGGTGGAGCG CATCGTCTAT ACCAGCAGCG TTGCCGTGCT CGGTCACTAC GCTGATGGCC GGGAAGCCGA TGAGGACACC ACCGCGCAAC TGGAAGACAT GATCGGGCAC TACAAGCGCT CCAAATATCT CGCCGAGGAG GCTCTGCGGG CCCTTTGCCG GGAGGAAGGT GCGCCCATCG TCATCGTCAA TCCGTCGACG CCCATAGGTC CGGCGGATCG CAAGCCCACC CCCACCGGGC GGATGGTGCG CGATGCTGCG GCGGGCCGCA TGCCGGCGTA TGTCGATACC GGTCTGAACG TGGTGCATGT GGATGATGTG GCCATGGGCC ATTGGCAGGC ATTTACGGAC GGCGAGGTCG GGGAACGCTA TATTCTCGGT GGCGACAACC TCCCCTTGGC GGCGATCCTC ACCCGTATTG CCGGTCTGAC CGGGCATCGT TCGCCGTGGC TGCGTATCCC CCGCCGCCTG CTTTATCCCC TGGCCTGGGG GGCGGAGCGG GTGGTGCGCC TGCGGGGGAG GGGGACACCG CTGGTAACGG TGGACGAGCT GCGCATGGCC GCCCACAAGA TGTATTTTTC GTCTGCCAAG GCGGAGCGGG TCCTGCATTA TACCCATCGT CCTGCGGAGG AGGCCTTGCG GGACGCGGTA CGATGGTTTG CGGAGCACCA CTATCTGTAG
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Protein sequence | MKALLTGASG FVGGAVLRRL LAEGLEIRVL HRTGADPANW EGLDVELVVG DLTDGPALDS AVAGCQAVFH VAADYRLWVP DPRAMYAANV GGSERLVRAA LDAGVERIVY TSSVAVLGHY ADGREADEDT TAQLEDMIGH YKRSKYLAEE ALRALCREEG APIVIVNPST PIGPADRKPT PTGRMVRDAA AGRMPAYVDT GLNVVHVDDV AMGHWQAFTD GEVGERYILG GDNLPLAAIL TRIAGLTGHR SPWLRIPRRL LYPLAWGAER VVRLRGRGTP LVTVDELRMA AHKMYFSSAK AERVLHYTHR PAEEALRDAV RWFAEHHYL
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