Gene AFE_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2075 
SymbolleuB 
ID7136735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1824777 
End bp1825853 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID643530446 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002426478 
Protein GI218667254 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAGCCATATT TGCGGGTGAC GGCATTGGTC CGGAAATCGT GGCGGCTGCC 
CGGCAAGTGC TGGATGCCGT GGATCAGGCC GCGCGGCTCG GCCTGCACTG CAGCGAGGGC 
CTGGTGGGCG GCGCGGCGCT GGATGCCAGC GATGATCCCT TGCCGGCCGC CTCCTTGCAG 
TTGGCTCTGG AGGCGGATGC GGTCATTCTG GGGGCGGTGG GCGGCCCCCG CTGGGACGCA 
TATCCGCCCG CCAAACGCCC GGAACAGGGA TTGCTGCGCC TGCGCAAGGG GCTGGATCTC 
TATGCGAACC TGCGTCCCGC GCAGATTTTT CCGCAGTTGC TGGATGCTTC CCCGTTACGC 
CCGGAGCTGG TGCGCGATGT CGACATCCTG GTGGTGCGCG AGCTGACCGG GGATATCTAC 
TTCGGTCAGC CGCGTGGTCT GGAAGTGGTC GATGGCAAGC GTCGCGGCTT TAACACCATG 
GTCTATGACG AGGATGAAAT CCGCCGCATC GCCCATGTGG CCTTCCGCGC TGCCCAGGGG 
CGTCGCAAGC AGTTGTGCTC GGTGGACAAG GCCAATGTCC TGGAGACCAC ACGTTTGTGG 
CGCGAGGTGG TCACCGAGGT GGCGCAGGAC TATCCCGATG TGCAGCTCAG TCACATGTAT 
GTGGATAATG CCGCCATGCA ACTAATCCGT GCCCCGGCAC AGTTCGATGT GCTGCTGACC 
GGCAACATGT TCGGTGACAT TCTTTCTGAC GAGGCTAGTC AGTTGACCGG CTCCATCGGC 
ATGCTGCCCT CGGCCTCACT GGGCGAGGGC CGGGCGATGT ATGAGCCCAT CCACGGCTCG 
GCGCCGGACA TAGCCGGGCA GGACAAGGCG AATCCCTTAG CCACGATTCT GTCCGTGGCG 
ATGATGCTGC GGTATTCTCT CGGTGCCGAG CTCTGGGCGC AGCGGGTGGA GGCGGCGGTG 
CAGCGAGTAC TGGATCAAGG CCTGCGTACT GCAGATATCG CGGCGCCGGG AGCGCCGGTG 
ATCGGCACCA AAGCCATGGG TGCCGCGGTG GTCGACGCCC TGAACTTCAA GGATTGA
 
Protein sequence
MKKIAIFAGD GIGPEIVAAA RQVLDAVDQA ARLGLHCSEG LVGGAALDAS DDPLPAASLQ 
LALEADAVIL GAVGGPRWDA YPPAKRPEQG LLRLRKGLDL YANLRPAQIF PQLLDASPLR 
PELVRDVDIL VVRELTGDIY FGQPRGLEVV DGKRRGFNTM VYDEDEIRRI AHVAFRAAQG 
RRKQLCSVDK ANVLETTRLW REVVTEVAQD YPDVQLSHMY VDNAAMQLIR APAQFDVLLT 
GNMFGDILSD EASQLTGSIG MLPSASLGEG RAMYEPIHGS APDIAGQDKA NPLATILSVA 
MMLRYSLGAE LWAQRVEAAV QRVLDQGLRT ADIAAPGAPV IGTKAMGAAV VDALNFKD