Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2069 |
Symbol | trpB |
ID | 7134477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1818778 |
End bp | 1819977 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643530440 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_002426472 |
Protein GI | 218665131 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.166636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACTT ATGCTTTGCC GGACGCGTTC GGACACTATG GTCCTTACGG CGGGCGTTTC GTTGCAGAAA CCCTGATTCC GGCGCTGGAG GAACTGGAGC GTGCCTACCA GGAGGCGCAG CGGGATCCGG AGTTTCGTGC CGAGCTGCAC AGTGAACTGC GCCAGTTCGT CGGTCGTCCC AATCCACTCT ATCATGCCGG GCGCCTTTCC AGGGAGTTGG GTGGAGCGCA AATTTACCTC AAGCGGGAGG ACCTCAACCA CACCGGCGCG CACAAAATCA ATAATGCCGT GGGTCAGGCG CTGCTCGCCC GGCGTATGGG CAAAAAACGG GTAATCGCCG AGACGGGCGC GGGGCAGCAT GGTGTCGCCA CGGCGACGGT CGCGACCCGC TATGGCATGG AATGCCTGGT GTATATGGGC GAGGAAGATA TCCAGCGCCA GTCCAGCAAT GTGTTTCGCA TGCGTTTGCT GGGGGCGCAG GTGACGGCGG TCAGCAGCGG TACCCGCACC CTGAAGGATG CGCTCAACGA AGCTTTGCGG GACTGGGTAA CCAATGTCGA AAGCACTTTT TATGTGATCG GAACGGTGGC GGGACCGCAT CCCTATCCGG TCATGGTGCG GGACTTTCAC CGGGTCATTG GCGATGAAGC GCGGGCGCAG TGCCTCGAAT TGACGGGACG GCTCCCCGAT TGTCTGATCG CCTGCGTGGG GGGGGGGAGT AATGCCATTG GCCTGTTTTA TCCCTTTATC GAAGACCGGG CGGTGCGGAT GATCGGCGTC GAAGCGGGTG GTCTGGGCCT TGGCACCGGA CAACACGCCG CCCCCCTGAC CACCGGACGT CCAGGGGTAT TGCATGGTAA CCGGACCTAC CTGATGGAAG ACGAAGACGG GCAGATTCTG CCGACCCACT CCATCTCGGC GGGGCTGGAT TATCCGGGGG TGGGACCAGA GCATGCCTAT CTGAAGGATA CCGGTCGGGC AGAGTATGTG GCGGCTACCG ATGAAGAAGC GCTGGCCGCC TTCCATCGCC TGTGCCGCAC CGAGGGCATC ATTCCGGCGC TGGAAAGCGC ACATGCGCTG GCTCACGCCT TCCGCCTGGC GCCCACCATG CGCTCTGATC AGACCATTAT CGTCAACCTT TCCGGGCGAG GCGATAAGGA TATCCACACC GTCGCCGCCC TGGAGGGTAT TCATTTATGA
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Protein sequence | MGTYALPDAF GHYGPYGGRF VAETLIPALE ELERAYQEAQ RDPEFRAELH SELRQFVGRP NPLYHAGRLS RELGGAQIYL KREDLNHTGA HKINNAVGQA LLARRMGKKR VIAETGAGQH GVATATVATR YGMECLVYMG EEDIQRQSSN VFRMRLLGAQ VTAVSSGTRT LKDALNEALR DWVTNVESTF YVIGTVAGPH PYPVMVRDFH RVIGDEARAQ CLELTGRLPD CLIACVGGGS NAIGLFYPFI EDRAVRMIGV EAGGLGLGTG QHAAPLTTGR PGVLHGNRTY LMEDEDGQIL PTHSISAGLD YPGVGPEHAY LKDTGRAEYV AATDEEALAA FHRLCRTEGI IPALESAHAL AHAFRLAPTM RSDQTIIVNL SGRGDKDIHT VAALEGIHL
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