Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2063 |
Symbol | metZ |
ID | 7135947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1812624 |
End bp | 1813838 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530434 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_002426466 |
Protein GI | 218667654 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.154855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCA AAAATACCAA CCCCGACTGG GCGGACCGGC TGCGTCCGGA AACCATCGCC ATCCGTGCCG GTATTCACCG TACCCAGGAG CAGGAGCACA GCGAGGCCAT CTTCCCCACC TCCAGCTTCG TCTTCGACTC GGCAGAAGAA GCCGCAGACC GCTTCGCCGG AAGGGTGCCG GGAAATATCT ATGCCCGCTT CACCAATCCT ACCGTACGCA CCTTTGAAGA ACGGCTTGCC GCGCTGGAGG GGGCGGAAGC CTGTGTCGCC ACGGCCTCGG GTATGGCCGC CTGTCTGACC GCCTTCATGG GGATACTCAA GGCGGGTGAC CATGTCGTCG CTTCCCGCTC CATTTTTGGT ACGACGGTGC AATTGCTCGG CAATATTCTC AGCCGCTTCG GAGTGGAGAC CAGCTTTGTG CCGCTGGCCG ATGTGCCGGC GTGGCGCGCG GCACTGCGTC CCAATACCCG TATGCTCTTC CTGGAAACGC CTTCCAATCC GCTCACCGAG ATTGGCGACA TGCAGGCCCT GGCGGATCTG GCTCACGTCC ATGATGCCTG GCTGGTGGTG GACAACTGCT TCTGCACACC GGCCTTGCAG CAGCCCCTCA AGTTTGGCGC CGATCTGGTC ATCCACTCCG CCACCAAATA TCTGGATGGG CAGGGGCGAA CCCTGGGGGG CGCGGTGTGC GGCAGTACCG AACTGCTCAA TAGCGGGCCC CGCAATTTCG TGCGGACGGC GGGTCCGAGC CTCAGTCCTT TCAATGCCTG GGTGCAGCTC AAGGGCCTGG AGACTCTCGG ACTGCGTATG GAGCGCCATT GCGCCAACGC CCAGAAGATC GCTGAATGGC TGGAGGCACG GCCGGAAGTG GCGCGGGTCT ATTATCCGGG CCTCGACAGC CATCCGCAGC AGGCCCTTGC CGCGCGTCAG CAGCGCCTGC CGGGCGCCAT CCTGTCCTTC GATCTGCACG GTGGCCAGAA AGCGGCGTGG GCCTTTGTCG ACGCCCTGCG CCTGCTTTCC CTGACCGCCA ATCTCGGCGA CGCCAAGACC ACCATTACGC ACCCGGCGAG CACCACCCAT AGCCGGGTCA GTCCCGAGGC ACGGGCTGCC GCGGGAGTCG GTGACGGCTT GCTGCGGATC AGTGTCGGGC TGGAACACGC CGATGACCTG CGCGAGGATA TGGAGCGTGG CTTTGCCGCT CTTGTGGCCC GCTGA
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Protein sequence | MNTKNTNPDW ADRLRPETIA IRAGIHRTQE QEHSEAIFPT SSFVFDSAEE AADRFAGRVP GNIYARFTNP TVRTFEERLA ALEGAEACVA TASGMAACLT AFMGILKAGD HVVASRSIFG TTVQLLGNIL SRFGVETSFV PLADVPAWRA ALRPNTRMLF LETPSNPLTE IGDMQALADL AHVHDAWLVV DNCFCTPALQ QPLKFGADLV IHSATKYLDG QGRTLGGAVC GSTELLNSGP RNFVRTAGPS LSPFNAWVQL KGLETLGLRM ERHCANAQKI AEWLEARPEV ARVYYPGLDS HPQQALAARQ QRLPGAILSF DLHGGQKAAW AFVDALRLLS LTANLGDAKT TITHPASTTH SRVSPEARAA AGVGDGLLRI SVGLEHADDL REDMERGFAA LVAR
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