Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2059 |
Symbol | tgt |
ID | 7135802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1808446 |
End bp | 1809561 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530430 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002426462 |
Protein GI | 218666730 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTT TCCAGTTGCT GGCCCGGGAC GGCGCGGCGC GGCGCGGCAC CATTCGTCTT CCCCGCGGCA CCGTGCAAAC GCCCGCGTTC ATGCCGGTGG GCACCTATGG CACGGTCAAG GCCATGTCTC CCGAGGAACT GAAGACGCTA GGGGCCGAGA TTATCCTCGG TAACACCTTT CATCTCTTTC TGCGTCCCGG CCTGGAGGTG ATCAGCGCGG TAGGCGGCCT CCACAGGATG ATGCACTGGG ACCGGCCCAT CCTCACCGAT TCCGGCGGTT TCCAGGTCTT CAGCCTTGGC GCGCTGCGCA AGCTGACGGA GGCCGGGGTG CAGTTTCGTG CGCCCACCGA TGGGCATATG GTTTTTCTGG GGCCGGAGGA GTCCATGCAG ATCCAGGCGG CCCTCGGTTC GGATATCGCC ATGGTTTTTG ACGAATGCAC GCCCCATCCC GCCAGTTACG AAGAAGCCCG TGTCAGCATG GAGCTTTCTC TGCGCTGGGC GGCGCGCTCC CATGCCGCCT ACGCTGGGCC CGGAGAGCTC TTCGGCATCG TTCAGGGTGG CATGTACGCG GACTTGCGGC GGCGCTCTCT GGCCGGATTG CAACGGCTGG ATTTTCCCGG CCTTGCCATC GGCGGATTGT CGGTAGGGGA GAGCAAGGTG GAGATGATGC AGGTGCTGGA CGACCTGATG CCCCATATGC CTGCGGACCG GCCCCGCTAC CTGATGGGTG TCGGCACCCC GGAGGATCTG GTCGAGGGCG TGCGCCGTGG TGTCGACATG TTCGACTGCG TGATGCCGAC CCGTAACGCC CGCAACGGCT GGCTGTTTAC CCGTGACGGC GTCCTCAAGC TGCGCAACGC CCGCTATGAA AAGGATGTGT TGCCACCGGA CCCGGCCTGT GCCTGCTACA CCTGTCAAAA CTACAGCAGG GCTTATCTCC GCCACTTGCA GCGCAGCCAT GAGATTCTCG GCGCACGCCT GAATACCCTG CACAACCTGC ACTACTATCA GGAACTGATG GCGGGGCTGC GGGAGGCCAT TGCTGCCGGT CGCCTGGACG CTTACGCGGA CGATTTCTAC CGCCGCCGTC GTGCTGGTTC CCTAGTCGGC GCCTAA
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Protein sequence | MSIFQLLARD GAARRGTIRL PRGTVQTPAF MPVGTYGTVK AMSPEELKTL GAEIILGNTF HLFLRPGLEV ISAVGGLHRM MHWDRPILTD SGGFQVFSLG ALRKLTEAGV QFRAPTDGHM VFLGPEESMQ IQAALGSDIA MVFDECTPHP ASYEEARVSM ELSLRWAARS HAAYAGPGEL FGIVQGGMYA DLRRRSLAGL QRLDFPGLAI GGLSVGESKV EMMQVLDDLM PHMPADRPRY LMGVGTPEDL VEGVRRGVDM FDCVMPTRNA RNGWLFTRDG VLKLRNARYE KDVLPPDPAC ACYTCQNYSR AYLRHLQRSH EILGARLNTL HNLHYYQELM AGLREAIAAG RLDAYADDFY RRRRAGSLVG A
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