Gene AFE_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2005 
Symbol 
ID7135441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1756864 
End bp1757550 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content60% 
IMG OID643530376 
Productisonitrile hydratase, putative 
Protein accessionYP_002426410 
Protein GI218665744 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTA CCGTGGGTTT TCTGGTGTTC CCGGGTCTTC AACTGCTGGA TCTGGCGGGT 
CCCTATGAGA TTTTTTCGGC CTTGCCGGAT GGCGAGATAC ATCTTTTCTG GAAAACCCGG
GAACCGGTGG CCTGTTCGGC GGGGATGCGC TTTTATCCGA CGACGACACT GGGCGATGGG
CCGCTGGTGG ATGTGCTTTG CATTCCCGGT GGCGTCGGCA TCAACCCCTT GCTATGCGAT
GAAGAAGTAC AGGCATGGGT GCAGCGCCAG GCGTCGACAG CGCAGTTTGT CACCTCTGTC
TGCACCGGCG CATTGCTTCT CGGAGCCGCA GGATTGCTCA AAGCGCGGCA CGCGACGACA
CATTGGCGTT ATCATGATCT CCTCGCCGAA TTCGGCGCCA TACCCGTCAG GGAGCGTGTG
GTTCGGGACG GCAATCTGAT CACCGGTGGC GGTGTTACTG CCGGGATAGA CTTTGGTCTC
GTGCTGGTAG CAGCGCTGCG CGGCCAAGCC GCAGCGGAAG AAATTCAGCT TGCCCTGGAA
TATGCGCCGG AGCCGCCTTT CCAGGCCGGC AGGCCGGAGG ATGCCCCCAA GGATATCGTG
GAGGTCGTCC TGCGTCGTAC CGAAACATTG CACGCCGAAC GCGAGCGGGT TACTGGGCAA
TGGACAACAC GTTCTCCAGC AGAATGA
 
Protein sequence
MTITVGFLVF PGLQLLDLAG PYEIFSALPD GEIHLFWKTR EPVACSAGMR FYPTTTLGDG 
PLVDVLCIPG GVGINPLLCD EEVQAWVQRQ ASTAQFVTSV CTGALLLGAA GLLKARHATT
HWRYHDLLAE FGAIPVRERV VRDGNLITGG GVTAGIDFGL VLVAALRGQA AAEEIQLALE
YAPEPPFQAG RPEDAPKDIV EVVLRRTETL HAERERVTGQ WTTRSPAE