Gene AFE_1986 details

Gene Information

• Locus tag: AFE_1986
• Symbol: ppiB
• ID: 7136115
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1741238
• End bp: 1741750
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643530359
• Product: peptidyl-prolyl cis-trans isomerase B
• Protein accession: YP_002426393
• Protein GI: 218666929
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAATC CGCAAGTAGT GCTGCACAGC AACAAGGGCG ATATCGTCAT TGAGCTGGAC 
GTCGACAAGG CGCCCAACAC CGTCGAGAAT TTTCTGAGGT ATGTCGATGA GGGCTTTTTT 
GACGGTACCA TCTTTCATCG CGTGATACCT GGCTTCATGA TTCAGGGCGG GGGTTTTACG 
GCGGACATGC AGCAGAAAGC CGTCCATGCG CCCATCGCCA ACGAGGCGGA GAATGGTCTG 
AAAAATGCGC GGGGCACTCT CGCCATGGCG CGGACCAATG ATCCCCACTC CGCCACCGCG 
CAGTTTTTCA TCAATCTGAC AGACAATGAT TTCCTTAACT TCAAGTCTGC CTCAGGATCG 
GGCTGGGGGT ATGCCGTTTT TGGTACGGTC ATCAGCGGGA TGGATGTGGT GGATGATATC 
GCCAAGACCC CGACCGGTAA TAAGGGCATG CACCAGGACG TGCCCAAGGA AACCATCTCC 
ATCGACAAGG GCGAGCGTCG GCCTGCGGCC TGA 

 

Protein sequence

MANPQVVLHS NKGDIVIELD VDKAPNTVEN FLRYVDEGFF DGTIFHRVIP GFMIQGGGFT 
ADMQQKAVHA PIANEAENGL KNARGTLAMA RTNDPHSATA QFFINLTDND FLNFKSASGS 
GWGYAVFGTV ISGMDVVDDI AKTPTGNKGM HQDVPKETIS IDKGERRPAA