| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1982 |
|---|
| Symbol | |
|---|
| ID | 7134586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1739731 |
|---|
| End bp | 1740177 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643530355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002426389 |
|---|
| Protein GI | 218665125 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00181912 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCATG TTTCACGCAA TATCTTGTTA GGATTAGCTG TTTTTATTTT CGGCAGCACC
TTGGCCCTGG CCGACATGGG GTCGTCCGTA GGGCCTGTTC CACAGCCTGC CGGCACAACG
GCTCAACCTG GCCAGGGCAC CGCTGCCCCG ATGATGCCGG TACAGCCGGC TCAGGGTCCT
CATGTGGGTC ACAAGGAGTT GCATCACTTT GCATCGGCCA TCGTGGCTAT TCGTCCGATC
GACAAGAAGG TGCGTCAGGA GATGTCCACG AAAAAAATGA CCGTCGCGCA ACATCATCAG
ATGCTCGTGA AATACGGAAC GCAAATAAAG CATGTTTTAG TTCAGAACCA TCTCACGCCA
GTGAAATATG AAATGTTGTT GAAAAAGGCG CAGACAGACC CGGCGTTTGC TCAGCGTACG
GAAGCTGTCA TGAAGTCCAT GGGTTAG
|
|---|
| Protein sequence | MYHVSRNILL GLAVFIFGST LALADMGSSV GPVPQPAGTT AQPGQGTAAP MMPVQPAQGP
HVGHKELHHF ASAIVAIRPI DKKVRQEMST KKMTVAQHHQ MLVKYGTQIK HVLVQNHLTP
VKYEMLLKKA QTDPAFAQRT EAVMKSMG
|
|---|
| |