Gene AFE_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1979 
Symbol 
ID7135437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1736231 
End bp1736602 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content56% 
IMG OID643530352 
Productthioredoxin 
Protein accessionYP_002426386 
Protein GI218667248 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.379887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATAG TAGAACTCAC GCAAGATAAT TTCGACGCCG TCGTGGCTGG AAACGACATG 
GTGCTGATCG ATTTCTGGGC GCCCTGGTGT GCACCCTGCC GCGCTTTCGC GCCCATTTTT
GAGGCCGCTG CTGAGAAGTA TCCGGATGTG GTATTTGCCA AGGTGAATAC GGACACCGAG
CAGGAACTTG CAACTTCTTT TCAGATCCGT TCCATTCCCA CCCTGACCAT CTTCCGCCAG
CAGATCGGTA TTTTCTCTCA GGCGGGCTCA CTCCCGGCCA GCGCGCTGGA AGAAGTGATT
CAACAGGCCC GGGCACTGGA TATGGACAAA GTCCGCGAAG AAATCTCCGC TCAGCCGGAT
ACAACGCACT GA
 
Protein sequence
MAIVELTQDN FDAVVAGNDM VLIDFWAPWC APCRAFAPIF EAAAEKYPDV VFAKVNTDTE 
QELATSFQIR SIPTLTIFRQ QIGIFSQAGS LPASALEEVI QQARALDMDK VREEISAQPD
TTH