| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1947 |
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| Symbol | |
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| ID | 7135849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1696671 |
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| End bp | 1699781 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643530320 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002426355 |
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| Protein GI | 218665127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG CGATTATGCG CTGGTGCATG GCCAACTACC TGCTGGTCGT GATCGCCGTT
CTGGTGTTGA TCGCCGGCGG TACGCTGGCA GTGATGAATA TCCCTTTGGA GGCTCTCCCG
GACATCTCGC CCACCCAGGT CATCGTCAAG ACTTCCTATC CGGGTCAGGC CCCGCAGATC
GTTCAGGATC AGGTGACCTA TCCCCTGGAG ACCACCCTGC AGGAGGTGCC CGGCGCCCAG
GCCGTGCGCG GCTATTCCAT GTTCGGGGAC TCCTATGTCT ACGTCCTCTT CAAAGGGGGC
ACCAGCATCT ATCAAGCCCG CAATCTGGTA CTCCAATACC TGAGCCAGGT GCAGTCCAAG
CTGCCGCCGG GAATCACACC GGCCCTGGGT CCGAACAGTT CAGGGGTGGA CTGGATCTTC
GAATACGCCC TCAGCGATCC CGGCGGGACG TTGAATCTCG CCCAACTCAC CACTTTGCAG
AACTGGTTTC TCAAATACGA GCTGCAGGGC ATCCCCGGCG TCGCAGAGGT GGCCACGGTA
GGGGGCATGG TGCAGGAGTA CCAGGTGGTG GTGAACCCCC AGAAACTCCT CGCCTACAAC
CTGACTCTGC CGGAAGTGGA GGCCGCCATC CGTGCCGCCA ATGGGGAGAC CAGCGGCTCG
GTGGTGGACA TGGGAGAGGC GAGCTATATC GTCCGCACGT CTGGTTATAT TCGCTCCCTG
AAAGACCTGG AGGATGCTTC GCTGGGGGTG CGCGACGGCG TGCCCATTAC GCTGCGTCAG
GTCGCTCGGG TACAGTTGGG GCCACAGTTG CCCAATGGCA TCGCCGATCT CAACGGCCAG
GGTCAGGTGG TGGGCGGAAT CGTGATGATG AACCAGGGTG GCAACGCCTA TACCCTCATC
CATCAGATCG AGCGCAAGCT GAAAGAGATC CAGCCCTCCC TGCCCAAGGG CGTGCAGGTC
GTCACCACCT ATAGCCAGGC CCCCCTCATC CAGCGCAGCA TTCATACCCT GACCGGCAAG
TTGCTGGAAG AGTCCCTGGC GGTGGCGCTC ATTTCTCTGC TCTTCCTGCT GCGCGCGCGT
TCGGCGCTGG TGGCCCTCGT TGCCCTGCCA CTGGGGATAC TGGCCGCCCT CCTCATCATG
TGGGCCATGG GCATCCCTGC CAACATCATG TCCCTGGGCG GTATCGCCAT CGCCATCGGC
GTGATGATGG ATGCCCCTGT GGTCATGATC GAAAACATGC ATAAGCACCT GGAGCAAACC
CCTGGCGTCG ATCCCTGGGC GGCGGCAACC GCTGCGGCGG CAGAGGTTGG TCCGGCGCTG
TTTTTCTCGC TGATCATCAT CGCCATTTCC TTTCTGCCGG TCTTCGCCCT GGGCGGTGAG
GAAGGCAAGC TCTTCGCACC CCTCGCCTTC ACCAAGACAT TTTCCGTGGC GGCCGCCGCC
ATGCTCTCCA TAACCGTAGT GCCCATTCTC ATGGCCTGGT TCATCCGCGG TCGCATCCTC
CCCGAAAGCA GGAATCCGCT GAACAGACTT TCCACTTTTA TCTACCGGCC AGTGATCCAT
ACTGTTCTGC GCGCACCCCG GGCCGTTTTG ATCATCGCCC TGCTGTTCAC CGCGACCCTC
TATTACCCCT GGAATCGTCT GGGTTCGCAG TTTATGCCGC CCCTGAATGA AGGATCGCTG
CTTTACATGC CCATATTCCA GGACCCCGCC ATCTCCATCG GCGAGGCGGC CATGATCCTG
CAGCAAACGG ACCGCATCCT GAAGACCTTT CCCGAGGTGA AAACGGTCTT TGGTCAGGCG
GGAAGAGCCC AGACGGCGAC GGATCAGGCA CCACTGTCCA TGTTTGATAC GACCGTCACC
CTCAAAGAGC CGGATGAGTG GCCTGTCGGA ATGACGATGC ACAAACTGCA AAATAAAATG
AACGAGGCGT TGCGCATTCC AGGTCTGTCC AATGTCTGGA CGCAACCCAT CAAGAACCGG
GTAGACATGG TCACCACTGG GCTGACCACG CCCCTCGGCG TCAAGGTGGC CGGTCGGAAC
ATCCATACTC TGAACCGCGT GGGGCAAGAG GTTCAAGCGG TTTTGCAGAA GGTACCTGGC
ACCCAAAGCG CCTATGCGGC ACGAATCACG GGCGGCCGGT ACATCGTCGT TCATACCGAC
CGCATCGCGG CCGCCCGCTA TGGTCTGTCG GTGGCGGATG TGAATCGTTT CGTGGAGACG
GCCATTGGCG GTGAAGTTCT GACCACCGCG ATACAAGGGC TGGAACGCTT CCCGGTGAAT
CTACGTTACC CTCGGGCACT GCGGCAATCC TTGGCCGCAT TGATGGAAAG CCGGGTCGCG
ACACCCAGCG GTGCCCAAAT CCCTCTCGCC CAGGTCGCCG ATCTGCATAT CGAGGGTGGA
GCCTCTATGC TCACCAGCGA CAACAGTCGA CTGAACAGTT GGATCTACAT CGACCTGAAG
CCCGGCACCA ACATCGGTGC CTATGTACCC CGCGCCAAGG CCGCGATTGC GAAGGACATT
CATCTCCCGG GTGCGTACAC ACTCTCCTGG GTAGGCCAGT ATCAGGTCAT GGAGCGAGCC
GCCAAGCGCC TGGAACTGGT CATTCCCGCC GTCATTCTGC TGATCGCCCT GCTCCTTTAC
TTCAACTTCA AGAACTGGGT GGAGGTGGCC ATCATCCTGC TCACCCTGCC CCTGTCCCTG
GTTGGAGGCT TCTGGCTCAT CTACTGGCTG AACTACAAGT TATCGGTGGC GGTGGCAGTG
GGTTTTATCG CCCTGGCGGG GGTGGCGGTG GAATTCGGAG TGGTAATGCT GCTTTACCTG
GATCAGGCCC TCCTCCGGCG GCAGGCACAT GGTACTTTGC AGACCTGGCA CGACCTTCGG
CTTGCCGTCA TCGAGGGGAC CATGCTGCGT CTGCGGCCTC TGGCCATGAC CTTCAACCTG
GTAGTGGGTG GTCTCTTGCC CATCATGTTC AGCCATGGTG CTGGTGCCGA TGTGATGAAG
CGCATTGCCG CCCCCATGGT GGGTGGTATG TTCAGCGCCG CATGGCTTGC GCTGCTGGTG
ATTCCTGCCC TTTATGCGCT ATGGCAGAAG CGGCGATTGG GCCTGCACTG A
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| Protein sequence | MIKAIMRWCM ANYLLVVIAV LVLIAGGTLA VMNIPLEALP DISPTQVIVK TSYPGQAPQI
VQDQVTYPLE TTLQEVPGAQ AVRGYSMFGD SYVYVLFKGG TSIYQARNLV LQYLSQVQSK
LPPGITPALG PNSSGVDWIF EYALSDPGGT LNLAQLTTLQ NWFLKYELQG IPGVAEVATV
GGMVQEYQVV VNPQKLLAYN LTLPEVEAAI RAANGETSGS VVDMGEASYI VRTSGYIRSL
KDLEDASLGV RDGVPITLRQ VARVQLGPQL PNGIADLNGQ GQVVGGIVMM NQGGNAYTLI
HQIERKLKEI QPSLPKGVQV VTTYSQAPLI QRSIHTLTGK LLEESLAVAL ISLLFLLRAR
SALVALVALP LGILAALLIM WAMGIPANIM SLGGIAIAIG VMMDAPVVMI ENMHKHLEQT
PGVDPWAAAT AAAAEVGPAL FFSLIIIAIS FLPVFALGGE EGKLFAPLAF TKTFSVAAAA
MLSITVVPIL MAWFIRGRIL PESRNPLNRL STFIYRPVIH TVLRAPRAVL IIALLFTATL
YYPWNRLGSQ FMPPLNEGSL LYMPIFQDPA ISIGEAAMIL QQTDRILKTF PEVKTVFGQA
GRAQTATDQA PLSMFDTTVT LKEPDEWPVG MTMHKLQNKM NEALRIPGLS NVWTQPIKNR
VDMVTTGLTT PLGVKVAGRN IHTLNRVGQE VQAVLQKVPG TQSAYAARIT GGRYIVVHTD
RIAAARYGLS VADVNRFVET AIGGEVLTTA IQGLERFPVN LRYPRALRQS LAALMESRVA
TPSGAQIPLA QVADLHIEGG ASMLTSDNSR LNSWIYIDLK PGTNIGAYVP RAKAAIAKDI
HLPGAYTLSW VGQYQVMERA AKRLELVIPA VILLIALLLY FNFKNWVEVA IILLTLPLSL
VGGFWLIYWL NYKLSVAVAV GFIALAGVAV EFGVVMLLYL DQALLRRQAH GTLQTWHDLR
LAVIEGTMLR LRPLAMTFNL VVGGLLPIMF SHGAGADVMK RIAAPMVGGM FSAAWLALLV
IPALYALWQK RRLGLH
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