| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1907 |
|---|
| Symbol | fabD |
|---|
| ID | 7134253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1663550 |
|---|
| End bp | 1664485 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643530283 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_002426320 |
|---|
| Protein GI | 218666528 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR03131] malonate decarboxylase, epsilon subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACGGCT CTATCGCCTT TGTTTTTCCG GGTCAGGGTT CGCAGTCTTT GAATATGCTG
GCCGACCTGG CTAACAGTCA TCCGTTGGTC AAAGAGGTTT TTGAAGAAGC TTCCGCGCAG
TTGGGCGAGG ACCTGTGGCG GCTCACGCAG GAGGGGCCCA CCGAAAAACT GAGCCAGACC
CGCTGGACGC AGCCGGTGAT GCTGACTGCC GGATATGCCG TATATCGGGT ATGGGAAGAG
GAAGGCGGCA TCTTTCCCGA TTTTGTCGCC GGGCATTCCC TGGGAGAATA TACCGCTCTG
GTGGTTGCGG ATGCGGTGGA TTTTGTGGAC GCTGTACGCC TGGTCGCGGA ACGAGGCCGC
CTGATGCAGG AAGCGGTGCC GGAGGGGGTG GGTGCCATGG CAGCCATCAT CGGCCTCGGC
GACGATGAGG TGAAACAGCT CTGTGCTCAG GAGGCAAGGG GTGAAGTGCT GGCTGCGGCC
AATTTCAACG CGCCGGGACA GGTGGTGGCT GCAGGTCATC AGGCGGCCGT CGAGCGGCTG
GTGGAGTCGG CACGTGCGGC CGGGGCCAAA CGTGTTGTCC TGCTTCCGGT CAGCGTGCCC
AGTCATTGCA GCCTGATGGA GCCGGCCGCT GAACGTTTCC AGTCTGCGCT GGAAGCCGTG
CAGTTCCGTA GCCCTAGGGC GATGGTGGTA CATAACGCCG ATGTGCAAAG CCACAACACG
CCAGACTCCA TCCGTGCCGT ACTTGCCAGG CAGTTATATT CGCCGGTGCG CTGGACGGAC
ACGATTCGCC ACCTCGCCCG GCAGGGAGCC ATGACCTTTG TGGAAATGGG CCCGGGGCGC
GTACTGTCGG GCCTGGGGAA ACGTATAGAG CCCAGCCTGA CCATGCTTCA CGTCGAAGAT
GGCAAAAGCC TCAAGGCTGC CCTGGAGGTG ATCTGA
|
|---|
| Protein sequence | MHGSIAFVFP GQGSQSLNML ADLANSHPLV KEVFEEASAQ LGEDLWRLTQ EGPTEKLSQT
RWTQPVMLTA GYAVYRVWEE EGGIFPDFVA GHSLGEYTAL VVADAVDFVD AVRLVAERGR
LMQEAVPEGV GAMAAIIGLG DDEVKQLCAQ EARGEVLAAA NFNAPGQVVA AGHQAAVERL
VESARAAGAK RVVLLPVSVP SHCSLMEPAA ERFQSALEAV QFRSPRAMVV HNADVQSHNT
PDSIRAVLAR QLYSPVRWTD TIRHLARQGA MTFVEMGPGR VLSGLGKRIE PSLTMLHVED
GKSLKAALEV I
|
|---|
| |