| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1888 |
|---|
| Symbol | hisZ |
|---|
| ID | 7135214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1646517 |
|---|
| End bp | 1647719 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643530264 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | YP_002426302 |
|---|
| Protein GI | 218665624 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTA CCGAAAGCCA CCCGGCCTGG TTGCTGCCCA GCGGATTTGA GGATGTTCTC
CCCGCACGAA CGGAGGCGCT GGAGCGCTGC CGCCGTGCGT TGCTCGATCT TTACGCGCAA
TGGGGTTACC GTCAGGTCAT CCCCCCCCTC GTAGAACATC TGGAGAGTTT GCTGACCGGG
AGTGCCGCAG ACCTCGACTT ACAGACCTGG AAACTGTTGG ATCAGGATAG TGGCCGGTTG
GTGGGGTTGC GTTCGGATAT GACGCCGCAA ATGGCTCGCA TAGATGCCCA GACATCTTCT
GCAAAGGAGG TCCGGCGTCT GTCTTATGCG GGTACGGTGC TGCGCGCCCG CCCCGATCTG
CTCGGTGGGA GCCGTGCCCC TTTTCAGATG GGCGCCGAGC TCTTCGGGGT GGAGGGGGCG
GAGGGAGATC TGGAGGTCCT TTCCCTGATG GTGGAGAGCC TCATCCACTG TGCCGTACCG
GATTTGTTGC TGGATATCGG CCACGTGGGT ATTTCCCAAA CGTTGGCCGA TGCGGCAGGC
CTGGAAGGCG CTTTACGCGC TGATCTGTTG CGGCATGTCG AGCGCAAGGC GTGGTCGGAT
GTACGGACGT GGCTGCGGGA GCATCATTGC GGTATGGAAC TGACCGCCGA TTTTGATGCC
CTGTCCGGCC TGCAGGGGGA TTTCGACGTA TTGGAGCAGG CTCGGCGGTA TCTGGGGCAT
TACCCCGCCG TTCGTGCCGC CCTGGATGAC CTGCAGCGCG TATGGTCGGT ATTACGGGCA
CGTTATCCAG ACCTGGCGAT TCAATGCGAT CTCTCGGAGA TTCACGGACA TCGCTATCAT
ACGGGCCTGC TGTTTTCGCT GTTCGGTCCG CAGCGCGGTG AGGCGTTGGC CAGTGGCGGG
CGCTATGATG ACATCGGTGC CGCCTTCGGG CGGCGACGGG CGGCGACGGG CTTCAGTCTG
GATATCAAAC CACTGCTACT GGGACTTCCG GATTCGGGGA GAATAGGGCG GATTTGGGCC
CCGGCTGGCA TGGACGATCT GTTGTGGCAG TCGATACAGG AACACCGCCG AGCTGGTTTT
GTGGTTTTAC AGGATCTGCT GCGTCAGGAT GCGCCGAGTC CGCAGATCTT GCGGGCACAG
GGATTTGACG CCGTCCTGAT CCAGGAAGCA ACGGGTTGGA AAGTACAGCG TCTCGACTCG
TGA
|
|---|
| Protein sequence | MTRTESHPAW LLPSGFEDVL PARTEALERC RRALLDLYAQ WGYRQVIPPL VEHLESLLTG
SAADLDLQTW KLLDQDSGRL VGLRSDMTPQ MARIDAQTSS AKEVRRLSYA GTVLRARPDL
LGGSRAPFQM GAELFGVEGA EGDLEVLSLM VESLIHCAVP DLLLDIGHVG ISQTLADAAG
LEGALRADLL RHVERKAWSD VRTWLREHHC GMELTADFDA LSGLQGDFDV LEQARRYLGH
YPAVRAALDD LQRVWSVLRA RYPDLAIQCD LSEIHGHRYH TGLLFSLFGP QRGEALASGG
RYDDIGAAFG RRRAATGFSL DIKPLLLGLP DSGRIGRIWA PAGMDDLLWQ SIQEHRRAGF
VVLQDLLRQD APSPQILRAQ GFDAVLIQEA TGWKVQRLDS
|
|---|
| |