Gene AFE_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1883 
Symbolppc 
ID7135878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1639731 
End bp1642520 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content59% 
IMG OID643530259 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_002426297 
Protein GI218667274 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAA AGGCCCTCAA CGGTAAAGCG CTCCGTAACC GCGTCAAGTT GCTCGGCAAC 
CTGCTGGGAG AGGTTCTGCG CGAACAGGCC GGGCATCGCG TATTCAACGC CGTGGAGCAA
CTGCGTCAGG GATACATTCG CCTCCACAAG CGGGAGGACC TTCGCCTCCG GGAGCGACTC
GCCCGCTTTA TCGACGCCCT TCCCCAGGAC GATCTGGTCC TGGTCATCCG TGCGTTTAAC
ACCTATTTCA GCTTGGTCAA CATCGCCGAA GAGGAGTTCC AGCACCTGCA CCGCCGCCGT
CTGCTCCAAA AGGGAAGCAT GCTGTGGACA GGGTCCTTCG AGGAAACCTT CCGCGAATTG
CAAGGCCAGG GTATCAACCC CGGACAATTG CAATTTCTCC TGGATCAGAT CCGTTATCTG
CCGGTATTCA CGGCACACCC CACGGAGTCC AAGCGCCGAA CGGTCCTCCA TGCCCTGCGC
CGCATTTTCG TGACCAGCAA GATGCTCGAC GATTCTGCGC TCAATGACGA AGAAGAACAG
GAGGTGATGG ACAACCTGCG GGCGCAGATC CAGATACTCT GGGAAACGGA AGAGGTGCGC
ACCAACAAGC CACAGGTGCA GGATGAGGTG GAAAACGGTC TGTTCTACTT CCGCGACAGC
CTGTTCGAGG CGGTACCTCT CACTTATCGG GCCGCGCGCC GGGCCGCGCG CCGGGTTTTT
GCAAATGCCG ACATCGATAT TCCCGCGTTT ATCCGCTTTG GTTCCTGGAT CGGGGGGGAC
CGGGACGGCA ACCCCAATGT TACCGCGGCC ATTACCGGCT GGGCTTTGCG CACCCAGAGC
ATTGAAGTAT TGAAAGAATA TCAGCAGCGT CTGAGCGACC TCTATCAGTT GCTCGGACAT
TCCAGCCGAT TCTGTGCCAT CTCTCCCGTT CTGCTTGCTT CATTGGAGCG TGATGCGGAC
GACTTTCCAG AACTTGCGGA GTGGGTGGAC CAACGTTTCC CCAGTGAGCC CTATCGCCGC
AAACTGCGGT ACATGATGAC CCGTCTCGAC TTGCGTCTGC GCCAACTGGA AAACGGTCAG
GTCTTGAATG AGTCGGCGGG CCCCGCCTAT GCCGCAGCGG AGGATTTCCT TGATGACCTT
TTGCTGGTAC GTGACTCACT GCGTGGCCAC AATGACGGGT ATATCGCCGA CAACGAGGTC
CAGGAGATCA TATGGCTGGT CCAGACCTTC GGCTTTCACC TGGCCAACCT GGACATCCGC
CAGGAATCTT CCGTGCACTC CCGCACCATC GCCGAGCTTT TCGCCGGAAT TCCAGGCTTC
GCCAACTACG TGGAGCTTTC CGAAGAAGCG CGCATGCTGG CGCTCTCCGA CGCGCTGCGC
CGCCCCGGTC CGCTGGTGGA GCAAGCGCCT GACCTGTCCC CTATGGCGGC GGAAACCTGC
GCGATGTTCC GCTGCATCGC CCAGCTACGG CGTGAAGTCA GCACCGCCGG CTTTGGCAAC
TACGTCATCT CCATGACCCA TGAGGCAAGC CACATTATGG AGGTACTGGT ACTTGCCAAG
GAGTTCGGCC TGGCCGGATG GTCACGGCAG GGTCTCTACA GCGAGATCGC CGTTACCCCG
CTGTTTGAAA CCATTCACGA TCTGGAGCGT ATGGATACGG TGATGTCCAC CCTGCTGGAC
AACCCGGTTT ACGCCAAGAT TCTCGGCAGT CAGGATGACA TCCAGGAGGT GATGCTGGGC
TATTCCGACT CCTGCAAAGA TGGCGGCATA CTTTCTTCCA GTTGGTCCCT GTATCAGGCC
CAGCTACGGC TGGCAGCCCT GGCAGACAAA CGGAAGATAC GGATTCGGGT TTTTCACGGT
CGCGGCGGCA GTGTGGGCCG TGGCGGTGGC CCCACCTATG AAGCCATACT GGCACAACCA
CCAGATACGG TACGCGGGCA GATCAAAATT ACCGAACAGG GCGAGGTGCT TTCCTTCAAG
TACGCCAATC TGGAGACTGC GGTGTATGAA CTGACCGTAG GTACGGCGGG TCTCATCAAG
GCGAGCATAG GACTGGTTCG GTCAGCATCT GGTGACAACC CGGACCATCT GAAAATCATG
GCGGAACTCA CCAGGACTGG GGAGGCTGTA TACCGCGATC TCACGGAAGG CACCCCAGGG
TTCATGGATT ATTTCTACGA GGCCACCCCC CTCAACGAAA TCGCCCACAT GAACATCGGC
TCGCGCCCCT CCCATCGCCA GCGCGGCGAT CGCTCCATGT CCTCCATCCG CGCCATTCCG
TGGATATTTG CCTGGGCTCA GTCACGACAT GTTCTTCCGG CATGGTACGG CCTCGGTTCC
GCCCTCGCCC GCTGGCGGGA GGACAAGCCG GAACGTTTGC AGGCACTACA GGACATGTAC
CGGCACTGGC CGTTCTTTCG GGCGCTCATG GGGAATATCG GCATGGCGAT GGCCAAGACC
GACATGGCGA TTGCCGGAGA ATACGCAGGC TTACCCAACG ACCGGGACGC CGCCATCGCA
ATCTACCGTA AAATTCAGGC AGAATTTGAA AGCAGTCAGG CGGAGATGCT CGCCATCGTC
GGGGCTGACC ATTTGCTTGC CGACAACCCA ACCCTGGCGT TCTCCCTGCA ACGGCGCAAT
GTGTATATGG AGCCTCTGAA TCATATTCAA CTCGCGTTGC TGCGGCGCTA TCGCAACGAC
GAGACCCCCC CGGAATTCCG GGAGATATGG CTGGATCCCC TGCTGCGCAC CATCAACGCC
ATATCCGCCG GTCAGCGCAA TACTGGTTAA
 
Protein sequence
MEKKALNGKA LRNRVKLLGN LLGEVLREQA GHRVFNAVEQ LRQGYIRLHK REDLRLRERL 
ARFIDALPQD DLVLVIRAFN TYFSLVNIAE EEFQHLHRRR LLQKGSMLWT GSFEETFREL
QGQGINPGQL QFLLDQIRYL PVFTAHPTES KRRTVLHALR RIFVTSKMLD DSALNDEEEQ
EVMDNLRAQI QILWETEEVR TNKPQVQDEV ENGLFYFRDS LFEAVPLTYR AARRAARRVF
ANADIDIPAF IRFGSWIGGD RDGNPNVTAA ITGWALRTQS IEVLKEYQQR LSDLYQLLGH
SSRFCAISPV LLASLERDAD DFPELAEWVD QRFPSEPYRR KLRYMMTRLD LRLRQLENGQ
VLNESAGPAY AAAEDFLDDL LLVRDSLRGH NDGYIADNEV QEIIWLVQTF GFHLANLDIR
QESSVHSRTI AELFAGIPGF ANYVELSEEA RMLALSDALR RPGPLVEQAP DLSPMAAETC
AMFRCIAQLR REVSTAGFGN YVISMTHEAS HIMEVLVLAK EFGLAGWSRQ GLYSEIAVTP
LFETIHDLER MDTVMSTLLD NPVYAKILGS QDDIQEVMLG YSDSCKDGGI LSSSWSLYQA
QLRLAALADK RKIRIRVFHG RGGSVGRGGG PTYEAILAQP PDTVRGQIKI TEQGEVLSFK
YANLETAVYE LTVGTAGLIK ASIGLVRSAS GDNPDHLKIM AELTRTGEAV YRDLTEGTPG
FMDYFYEATP LNEIAHMNIG SRPSHRQRGD RSMSSIRAIP WIFAWAQSRH VLPAWYGLGS
ALARWREDKP ERLQALQDMY RHWPFFRALM GNIGMAMAKT DMAIAGEYAG LPNDRDAAIA
IYRKIQAEFE SSQAEMLAIV GADHLLADNP TLAFSLQRRN VYMEPLNHIQ LALLRRYRND
ETPPEFREIW LDPLLRTINA ISAGQRNTG