Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1879 |
Symbol | |
ID | 7134640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1635380 |
End bp | 1636471 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530255 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002426293 |
Protein GI | 218666558 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG CATTTGTCAT TGTCATTCTT GTATTGCTGA TCCTTTTCGG CGGTATTTTC GGCTTCAAGC TCTACGGCAA CTATATGATG CACCAGGCCC TGGCGCATAT GCCCGTACCG GTCGTCAGCG TCAGCGCCAG CAAGGTGGTA GAGCGGGAGT GGCACCCGGA AGTAACTGCC GTGGGATCGT TTGCCGCCAT CCAGGGTGTG GAGGTGACGC CCCAGTTGGG CGGTGCCATT ACCGGTATCT ATTTTCATTC CGGAGAATAC GTCAAGGCCG GTACCCCTCT GATCCAGATC GACAACAGCA ACCAGTTGGC GCAACTGGCC AGCGACGAGG CTCAGCGGCG ATTGGCCCAG ATCAATCTCC GCCGGACGCA GACGCTCATC GCCACCAAGG CCGCCAGCCA GTCTCAGCTC GATTCCGCGG TGGCCAGCTA CCAAAGCGCG GTCGCCGCCG TAAAAAATGA CCACGCCACT CTCGCAAAAC TCGCCATCCG CGCGCCCTTC AGCGGCTATC TCGGAGTTCG CCAGGTAGAC CTGGGGCAAT ACATCATCCC CGGGACCGCC ATGGTGGATC TCCAGTCCTG GGATCCCCTC TTTGTGAACT TTACGGTGCC TCAGAGTGAT TTCGCCCGCA TCCATGTAGG CACACCCGTT CAGGTGGAGG TGGACAGTTA TCCCGGCCAG ACCTTCAGCG GCAAGATCAC CGCCATGGGG GCGGCCATCA ATACCGCCAC GCGCCAGATT GACGTCCAGG CCACGGTGCC TAATCCAAAA ACCATCCTGC GCCCGGGTAT GTTCGGGAAT GTCACGGTGA TCGAGAAAAG GCTGGAGAAA GTGTTGACCG TACCGGCCAG CGCCATCACC TATAATACCT TCGGTGACTT TGTCTATGTG GTGGAGAAAA AAACCATCCA TGGCAAGGAA AGCCAGATCG CCCTCCAGCG CATCGTCAAG ACCGGTATCC AGCGAGGCAG CGAGGTACAG ATTCTGTCGG GGCTGCGTGC GGGAGAGCTG GTGGTCACCG GGGGGCAGAT CAAGCTCCAC GAGGGTAGTC CTGTCAAAAT CCCCGCCAGC GGCAAAGCCT GA
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Protein sequence | MKKAFVIVIL VLLILFGGIF GFKLYGNYMM HQALAHMPVP VVSVSASKVV EREWHPEVTA VGSFAAIQGV EVTPQLGGAI TGIYFHSGEY VKAGTPLIQI DNSNQLAQLA SDEAQRRLAQ INLRRTQTLI ATKAASQSQL DSAVASYQSA VAAVKNDHAT LAKLAIRAPF SGYLGVRQVD LGQYIIPGTA MVDLQSWDPL FVNFTVPQSD FARIHVGTPV QVEVDSYPGQ TFSGKITAMG AAINTATRQI DVQATVPNPK TILRPGMFGN VTVIEKRLEK VLTVPASAIT YNTFGDFVYV VEKKTIHGKE SQIALQRIVK TGIQRGSEVQ ILSGLRAGEL VVTGGQIKLH EGSPVKIPAS GKA
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