Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1699 |
Symbol | |
ID | 7135759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1472073 |
End bp | 1474577 |
Gene Length | 2505 bp |
Protein Length | 834 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643530081 |
Product | TraG/TraD family protein |
Protein accession | YP_002426120 |
Protein GI | 218665095 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAACA GTATCCATGC TCCCAACTCC ACCGTCTCCG ACTACAAGAT CCAGCGCCTC GCCCGGGGCG GCAGGCTCAA GACGACGCTC GCCGGCGTTG CGGCGGGCGT TCTCGGTTAC ACGTTGGGCA TATCCTATGT GGCTCGGGAC GTGTTTCCCG GCTACCAGTG GACCGATGAT TTCATCCAGA AGGCGCATGC CTACATCGCA TTGCCCTACG GCTGGCGGCT ATATGATCCC CTGCCGTTCC TGCGGCCGAT GATCCTGAAC ATCCACTATC CAGTGATTCA TCAGGCGTTC TATGACGCCG GTCTGCCGGC CGTGGTGCTG GGCATACTCA CGGCGGGGAT ACTTGGGAAA AAGCACAAGG ACGCGCAAAA AGCCGTCCTG GACAATCCTG TGCATGGCTC AGCGCATTGG GCGGGTAAAA GTGATGCGAT CCGGGCGGCG CTCCTGCCTT CTCCACCGCC AAAGACGGTA ATGGACTCCC TGCGCCCCTG GCTTGGCATG CACCCTGCGA AGGGCATGCA CCCTGCGAAG GGCATGCACC CTGCAAAGGG CTTGCACCCT GCAAAGGGGC TCAAGGGAGG TTCCGACTGG GCCCGCTGGC AAGAGCGGCG GGAAAAGCGG AAAAAGGAGG CCGCCGAGTG GCGGAAGAGG AGGGCGGAGA GGGAGAAGAA ACGCCTGTCG GAGATCCCGG AGCCGACCGT TTTCGACCGG TTCGACTCTC CCCATGTCTG CTATGTGGGG GCCTTCGTCG AGAACGGCGC GGCCACCCCA CTCCAGCACA CCGGGGCGGA ACACATCCTG GTCTTTGCCC CGACCCGATC GGGCAAGGGC GTGGGCCTGG TGCTGCCCAC GTTGCTGGAC GGCTGGATGG ACTCGGTGGT CGTGCATGAC ATCAAGGGGG AAAACTTCCA CCTGACGGCG GGCTATCGCA AGGCCATGGG CCACCACATC CTGAAGTTTT CACCGGGATC GGTATCCGAA GAAGGTTGCC ACTTCAACCC GCTGGACGCG GTGCGTGTCG GAACCCAATA CGAAGTCAAG GACGTGATGA ACATTGCCAC GATGATTGTG GACCCGGATG GCAAGGGCCT GAACGATCAC TGGCAGAAAA CCGGTTTTGC CCTGCTCACG TCCATCATCC TGCATGTGCT CTACGCCATG CCGGACAAGA CCCTGCGGGG CGTTGCCGCC TATCTCAACG ATCCCACGCT GGAAAGCGTG GACGTAGCCT TTGAGCGCAT GATGCAGACG GAGCATGACC CGGATGAGCA ATATGGCTGG AGGGACGGCA ACGGCCAGTG CTCCAGGGTC CATCCGGTCA TCGCGCAATC CGCGCGGGAG ATGCTGAACA AGGCCGAGAA TGAAAAATCG GGCGTCATTT CGACCATGAT GAGCTTCCTG TCCCTCTACC GGGATCCCAT CGTCGCGAAG TGGACCGAGT ATTCGGACTT TCGCATCGCC GACCTTCAGG ACGCCGAACA ACCCGTCTCT CTGTACCTGG TCACCAGTCC GGAAGACAAG AACCGGCTCA AGCCCCTCAT TCGCCTGGTG CTCAACCAGA TTGCCTCCCA GTTTACCGCG GAAGAACGCC TGGAAGCGAA AGACGGGCGA ATCGTCGCCA AGGGAAAGCA TCGGCTGCTC TTGCTGCTCG ACGAATTCCC GAGCCTGGGC AAACTCGATG TGTTCCTGGA CAGCATCGCC TTCCTCGCAG GCTACAACGT CAAGCTATAT CTCATCACGC AGGACATCGC CCAGCTGGAA GATGAAGGCC ACGGCTACGG CAAGGCCGGG GCCAAGACCA TCATCGGCAA CTGTCACATC CGGGCGGCCT ACGCGCCCAA CCAGGTCGAG ACGGCCAAGT GGATCTCTGA CATGCTGGGC ACCCGTACCG TGACCATGGA AAACGACAAC CAGAGTTTTG ACGGTTCCCT GTTCGGTCAG AACAAGGGCT ATTCCACGAG CCTCAGCTAC CAGTCCCGCC CCCTGCTGAC AGCGGATGAG GTCATGACCT TGCGGGGACC GGAAAAGGAA GGTGCCAATA TCAAGACCCC CGGCGATATG CTGGTATTCG CGGCGGGCTT TCATCCCATC TATGGACAGC AGCTGCTCTA TTTCAAGAAC CCGGAATGGC TCGATCGGGC ATCCATGCGG TGGCCAGAGA AGAGCGATTC CATCCCCGGA GCCAGGAAAG ACTACAAGGC CATTCTGGGT GAGTCGGGTG GAACGCTACC CATCCCCCAT ATCGAGAAAA AGCCGGAAGG GCAGGATCCT GTCGAGGAGG TGAGCGAGGC TGAAAGGGCG GCATTGGCCG CGGCGGCTGG CGATCTGGAC GCCGTGGCAG GAGAGTGCAA GCCCCTCGCG GGGTGCAAGC CCTTTGCTGA GTGCAAGCCA CTCGCGGGGC GCAAGCCCAC GGGGGACGGG AAATATGACA CGTCCGAGCG GGACGCGGAG AGAGGCGTTA TCGGGGGTTT GATGGGGGAT GACGGCGACG GATGA
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Protein sequence | MVNSIHAPNS TVSDYKIQRL ARGGRLKTTL AGVAAGVLGY TLGISYVARD VFPGYQWTDD FIQKAHAYIA LPYGWRLYDP LPFLRPMILN IHYPVIHQAF YDAGLPAVVL GILTAGILGK KHKDAQKAVL DNPVHGSAHW AGKSDAIRAA LLPSPPPKTV MDSLRPWLGM HPAKGMHPAK GMHPAKGLHP AKGLKGGSDW ARWQERREKR KKEAAEWRKR RAEREKKRLS EIPEPTVFDR FDSPHVCYVG AFVENGAATP LQHTGAEHIL VFAPTRSGKG VGLVLPTLLD GWMDSVVVHD IKGENFHLTA GYRKAMGHHI LKFSPGSVSE EGCHFNPLDA VRVGTQYEVK DVMNIATMIV DPDGKGLNDH WQKTGFALLT SIILHVLYAM PDKTLRGVAA YLNDPTLESV DVAFERMMQT EHDPDEQYGW RDGNGQCSRV HPVIAQSARE MLNKAENEKS GVISTMMSFL SLYRDPIVAK WTEYSDFRIA DLQDAEQPVS LYLVTSPEDK NRLKPLIRLV LNQIASQFTA EERLEAKDGR IVAKGKHRLL LLLDEFPSLG KLDVFLDSIA FLAGYNVKLY LITQDIAQLE DEGHGYGKAG AKTIIGNCHI RAAYAPNQVE TAKWISDMLG TRTVTMENDN QSFDGSLFGQ NKGYSTSLSY QSRPLLTADE VMTLRGPEKE GANIKTPGDM LVFAAGFHPI YGQQLLYFKN PEWLDRASMR WPEKSDSIPG ARKDYKAILG ESGGTLPIPH IEKKPEGQDP VEEVSEAERA ALAAAAGDLD AVAGECKPLA GCKPFAECKP LAGRKPTGDG KYDTSERDAE RGVIGGLMGD DGDG
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