Gene AFE_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1674 
Symbol 
ID7137051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1448509 
End bp1449495 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID643530057 
ProductSua5/YciO/YrdC family protein 
Protein accessionYP_002426096 
Protein GI218667682 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCGA GTAAGAAATT GCTCGCCGCC ATGCAGCGGG CTGCGGAGAT CCTGCGCAGC 
GGCGGCCTCG TCGTCTTCCC CACGGAGACC GTCTACGGCC TCGGGGCCGA TGCGGAAAAC
CCCGCCGCCG TGGCCCGCAT TTTCGCGGCG AAGGGTAGAC CGGCTGATCA CCCGCTGATC
GTGCATATGG CACGGCGCGA TCACCTTAGT CAATGGTCCA GGGATATCCC GCCAGCGGCC
TTCGTCCTCG CGCGGCGTTA TTGGCCAGGT CCACTTACCT TGATTCTGCA CCGTGCCTGC
CGCGTGCCCG ATAGGGTCAC CGGTGGTCAG GATACGGTAG GACTGCGGGT TCCCGATCAT
CCCCTCGCCC TGATGCTGCT CGAAGCTTTC AGCGGCGGCA TCGCCGCCCC TTCGGCCAAC
CGCTTTGGCC AGGTAAGCCC CACCACCGTA GCACATGTGC GCGAGGAACT GGGCGATGCC
ATGGACTTCA TCCTGGACGG CGGGCCCTGC CGGGTGGGCA TCGAGTCCAC CATTCTCGAC
CTGAGCGGGC ATCAGCCCCG GCTGCTGCGT CCCGGCGCGA TTACGCTTGC CGAGATCGAA
GCGGTCCTGG AGCAGCCCGT CATTCCGCAG GGAAATGATG CGCTGCGGGC GCCGGGGATG
TTGCGCTCCC ATTACGCCCC AAGAACCCCT CTCTACTTGG TGCCGACGGG GCATCTGAAA
GCGGAAATAT GCCGGCGCCT CAGGCAGGGG CAACGCGTCG GGGTGCTGGC GATGCCCGCC
ACGCAGTTGC CCGAATCCTG CCTCCGGCAC CATATGCCGC CGCATCCGGC AGGGTGGGCC
CGCGAACTCT ACGCGCAGTT GCGCGCTCTG GATCAGCAAG GGCTCGATGG TCTGCTGATT
GAGGCACCAC CCAGCGGTGC CGACTGGCAG GCAGTAAGCG ACCGACTGGC GCGCGCCGCA
TCAGCGCATA CGACCTTTCG TTTCTAA
 
Protein sequence
MPSSKKLLAA MQRAAEILRS GGLVVFPTET VYGLGADAEN PAAVARIFAA KGRPADHPLI 
VHMARRDHLS QWSRDIPPAA FVLARRYWPG PLTLILHRAC RVPDRVTGGQ DTVGLRVPDH
PLALMLLEAF SGGIAAPSAN RFGQVSPTTV AHVREELGDA MDFILDGGPC RVGIESTILD
LSGHQPRLLR PGAITLAEIE AVLEQPVIPQ GNDALRAPGM LRSHYAPRTP LYLVPTGHLK
AEICRRLRQG QRVGVLAMPA TQLPESCLRH HMPPHPAGWA RELYAQLRAL DQQGLDGLLI
EAPPSGADWQ AVSDRLARAA SAHTTFRF