Gene AFE_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1668 
Symbol 
ID7136348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1442735 
End bp1443514 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID643530051 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002426090 
Protein GI218667979 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAT CTACCACCGA TAAAAACTCC TCCATCCAGG TGATCGCCCG GTTGCGTGCT 
CTGCTGGATG CCCTCGCGGC GGAAGGGGGG AGCGCACCAC TCAAAATACT CGCCGCCGTC
ACCGGACTCG CACCCTCCAC CGCCTTCCGC ATTCTGGCCT CAGCACAGGA CAACCAACTG
ATCGCTCGCG ATGCTGGCGG CCATTACCGC TTCGGCCAGC GCTTGCAAGA CTGGGCGCAG
CTCGCCCATG GCCGCAGCGA CCTACGCGCC GTCGCCCGGC CCATCATGGC CTGGCTGCGC
GATCAGGTGC AGGAGACGGT GAATCTTACC ATCCAGGAGG GCGACGAAGT GATCTATGTA
GAGCGCGCCA CCTCGTCGCG GATGATGCGG GTGGAGCAGG TGATCGGCAG TCGCGCGCCG
CTACATACCA CCGCCGTCGG CAAGCTCATG CTGGCGCTGA ATGGCGAAGC TGCTGTCCAA
AGTTACGCTA CCCGCACCGG CTTGCCGGCG CTTACTGTTC ATACCCTGCG TCAGGCCGAT
GCCCTCTGGG AAAACGCCAG AAGCGGACTT GAACGTGGCT ATGCACTGGA CAATGAGGAA
GCCGAGATTG GCGTCGGTTG TCTCGGCGTG CTGCTCCACA GCCGATTGCC CTGGAATGCC
GGCCTCAGTA TCTCCGCGCC TATTGAGCGT CTCCAGGAAA GCTGGGTACC GATGCTACAG
GAGGCTGCGC GGCGGATAGA TAGGGGCCAC CAGAAAAATG ATGTACCGTC CATAAGTTGA
 
Protein sequence
MSTSTTDKNS SIQVIARLRA LLDALAAEGG SAPLKILAAV TGLAPSTAFR ILASAQDNQL 
IARDAGGHYR FGQRLQDWAQ LAHGRSDLRA VARPIMAWLR DQVQETVNLT IQEGDEVIYV
ERATSSRMMR VEQVIGSRAP LHTTAVGKLM LALNGEAAVQ SYATRTGLPA LTVHTLRQAD
ALWENARSGL ERGYALDNEE AEIGVGCLGV LLHSRLPWNA GLSISAPIER LQESWVPMLQ
EAARRIDRGH QKNDVPSIS