Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1603 |
Symbol | |
ID | 7136803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1382087 |
End bp | 1383223 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529988 |
Product | ABC transporter, permease protein, putative |
Protein accession | YP_002426027 |
Protein GI | 218665632 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAGC GTCTCTCGGT CATGCTGATG AAGGAGTTCC TGGAACTCCG GCGCGATCGC TGGGCGATGT TCCGCCTCAT AGTCCCGATG ATTCTCCAGA TGCTTGTCTT CGGCTATGCC GCCACCTTCA CCGTGCACCA TGTCACCACC GCAGTGCTCG ATCTCGATCA GAGCCAGGCC AGCCGCAGCC TGATCTCGCA TTTCGCCGCC ACCTCCCGCT TCGACATCGT CGACATGGCC ACGAATCAGA GGGAAATCAC CAGCGACATC GACCACGACA GGGCCGTGAT CGCCATCGTC ATTCACGCCG GCTTCAGCCG CGACCTGGAA AACGGGAAGA GCGCACCACT GCAAGTCATC GTGGATGGTA CAAACTCGAA CACGGCACTC ATTGCACTCG GCTACATCGC CCAGATCGTC GCCAACTTCT CCACCGAGCA GGCGGCAAGC CGCGTCTTTC CTTCCCGGCC AGGCCCCGCT GCGGCTCCGG TCGTCGGTAT TTCGCTGCAG ATGCGCCCCT GGTTCAACGA AGGGCTCGAC GAGCGCTGGT TCTTCATCCC CGGAGTGATC GGCACCCTGA CACTGATGCA GGTGGTCAGC CTCACCGCGT TCGCCATCGT ACGCGAGCGC GAGGTTGGCA CGCTCGAACA GATTCTCGTC AGCCCAATCC GGCCCGTTGA GTTCATTCTC GGCAAGACCG TGCCATTTTT CCTCATTGGG CTCGGCGACA TCGCGCTGGT CAGTTTCGTC GGCATCGCCT GGTTCCACGT GCCTTTCATC GGTGACCCAT GGGTGATGCT GGTCGGGTCC GCACTGTTTT TGCTGGCGGT GGTGGGCATG GGTTTACTGA TGTCAACTTT TTCGCGCACG CAGCAGCAAG CCTTCGCCCT CAATTTCTTT CTGCTCAATC CCTTTTTCAT CCTTTCGGGA TTCGCTTTTC CGATCGCCGC CATGCCAAAA GTCTTGCAAT GGTTTACCAT GATCAATCCG TTGCGTTATT TTTTGGTGAT CATCCGGGCG GTTTTTCTCA AAGGGGTAGG CTTCGCGGTA CTCTGGCCGG AACTCGGGGC CTTGGCATTG CTCGCGTTGA TAATGTTGAC GATAAGCGTG CTGCGTTTTC GTAAATCACT TGATTAG
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Protein sequence | MFERLSVMLM KEFLELRRDR WAMFRLIVPM ILQMLVFGYA ATFTVHHVTT AVLDLDQSQA SRSLISHFAA TSRFDIVDMA TNQREITSDI DHDRAVIAIV IHAGFSRDLE NGKSAPLQVI VDGTNSNTAL IALGYIAQIV ANFSTEQAAS RVFPSRPGPA AAPVVGISLQ MRPWFNEGLD ERWFFIPGVI GTLTLMQVVS LTAFAIVRER EVGTLEQILV SPIRPVEFIL GKTVPFFLIG LGDIALVSFV GIAWFHVPFI GDPWVMLVGS ALFLLAVVGM GLLMSTFSRT QQQAFALNFF LLNPFFILSG FAFPIAAMPK VLQWFTMINP LRYFLVIIRA VFLKGVGFAV LWPELGALAL LALIMLTISV LRFRKSLD
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