Gene AFE_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1603 
Symbol 
ID7136803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1382087 
End bp1383223 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content58% 
IMG OID643529988 
ProductABC transporter, permease protein, putative 
Protein accessionYP_002426027 
Protein GI218665632 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAGC GTCTCTCGGT CATGCTGATG AAGGAGTTCC TGGAACTCCG GCGCGATCGC 
TGGGCGATGT TCCGCCTCAT AGTCCCGATG ATTCTCCAGA TGCTTGTCTT CGGCTATGCC
GCCACCTTCA CCGTGCACCA TGTCACCACC GCAGTGCTCG ATCTCGATCA GAGCCAGGCC
AGCCGCAGCC TGATCTCGCA TTTCGCCGCC ACCTCCCGCT TCGACATCGT CGACATGGCC
ACGAATCAGA GGGAAATCAC CAGCGACATC GACCACGACA GGGCCGTGAT CGCCATCGTC
ATTCACGCCG GCTTCAGCCG CGACCTGGAA AACGGGAAGA GCGCACCACT GCAAGTCATC
GTGGATGGTA CAAACTCGAA CACGGCACTC ATTGCACTCG GCTACATCGC CCAGATCGTC
GCCAACTTCT CCACCGAGCA GGCGGCAAGC CGCGTCTTTC CTTCCCGGCC AGGCCCCGCT
GCGGCTCCGG TCGTCGGTAT TTCGCTGCAG ATGCGCCCCT GGTTCAACGA AGGGCTCGAC
GAGCGCTGGT TCTTCATCCC CGGAGTGATC GGCACCCTGA CACTGATGCA GGTGGTCAGC
CTCACCGCGT TCGCCATCGT ACGCGAGCGC GAGGTTGGCA CGCTCGAACA GATTCTCGTC
AGCCCAATCC GGCCCGTTGA GTTCATTCTC GGCAAGACCG TGCCATTTTT CCTCATTGGG
CTCGGCGACA TCGCGCTGGT CAGTTTCGTC GGCATCGCCT GGTTCCACGT GCCTTTCATC
GGTGACCCAT GGGTGATGCT GGTCGGGTCC GCACTGTTTT TGCTGGCGGT GGTGGGCATG
GGTTTACTGA TGTCAACTTT TTCGCGCACG CAGCAGCAAG CCTTCGCCCT CAATTTCTTT
CTGCTCAATC CCTTTTTCAT CCTTTCGGGA TTCGCTTTTC CGATCGCCGC CATGCCAAAA
GTCTTGCAAT GGTTTACCAT GATCAATCCG TTGCGTTATT TTTTGGTGAT CATCCGGGCG
GTTTTTCTCA AAGGGGTAGG CTTCGCGGTA CTCTGGCCGG AACTCGGGGC CTTGGCATTG
CTCGCGTTGA TAATGTTGAC GATAAGCGTG CTGCGTTTTC GTAAATCACT TGATTAG
 
Protein sequence
MFERLSVMLM KEFLELRRDR WAMFRLIVPM ILQMLVFGYA ATFTVHHVTT AVLDLDQSQA 
SRSLISHFAA TSRFDIVDMA TNQREITSDI DHDRAVIAIV IHAGFSRDLE NGKSAPLQVI
VDGTNSNTAL IALGYIAQIV ANFSTEQAAS RVFPSRPGPA AAPVVGISLQ MRPWFNEGLD
ERWFFIPGVI GTLTLMQVVS LTAFAIVRER EVGTLEQILV SPIRPVEFIL GKTVPFFLIG
LGDIALVSFV GIAWFHVPFI GDPWVMLVGS ALFLLAVVGM GLLMSTFSRT QQQAFALNFF
LLNPFFILSG FAFPIAAMPK VLQWFTMINP LRYFLVIIRA VFLKGVGFAV LWPELGALAL
LALIMLTISV LRFRKSLD