Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1556 |
Symbol | |
ID | 7135830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1347049 |
End bp | 1348044 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643529944 |
Product | site-specific recombinase, phage integrase family |
Protein accession | YP_002425983 |
Protein GI | 218667294 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCATCT GGATCGACAA CAAAGATCGT CGAAATGTCC AAGTTCAAGT TGACGGCAGA CGCCTACATC GCATCCTGCC AGCCGGGTCG TCTGCGCGTG ACGCCAAGCA AGTCGAAGCC AGACTTCGAG CCGAACTGAC ATCGGCAAGA CCCCTGCCGG AGCGTGCCGG CGATCCACCG CTTGCCGCTG TCATGCCCTT GTACCTCAAG CATCTGGAGC ACCTGCGTAG CCCGGAGACC GCCCGATTCC ATGCTGCCCG CATCACCCCC TGGCTCGCCC AATACACCGC CTCAGAGGCC CCAAAATGCG CCGCGATGAT TATCCGCGAC ATGACCGGAG CCTATGCGCC CGCGACGATC AACCGCAGTC TGGGCGCGCT CAAGAAGGCC CTCACGCTGG CCTGGGAACA GGAACTGACC CCAGAGAACT ACGGTGCCAG GATCAAGCGC CTGCCGGAGC ACAACGAGCG GCATATCTAC CTAACGCTGG AGCAGGTCAA CGAACTCGCC AGCCACGCAT CCGATCCGGT CGCTGCCGCG ATTTGGATTG CTCTATTTAC CGGCTGCCGT CGCGGCGAAA TCACGAAGCT CAAAGCCGAG GACGTAGGGG AAACGACGAT CACCATCCGC GCTGGGAACA CTAAAACGCT TAAAACGCGT ACCGTACCCA TCATCGGACC GATGCGCCTC TGGCTACCAT TCATCCCTCT CCCCATCAAC GCCGAAGGGC TTAAGTCTGG ATTTCGTCGC GCCCGCGAGA AGGCCGGATT GCCGCACTTG CACTTTCACG ATCTACGGCA CTCTTGCGCA TCAATCCTGC TAGCATCAGG AGCAGACCTG TACACCATCA GCCGTATCCT AGGTCACTCA TCCACTAAGA TGACAGAGCG TTACGCGCAC CTGCAAACCG ACGCGCAATC CATCGCCTTG GAGCGTGCTT TTTCGGAAAA TGCACTCAAC AATGCACTCA ACAAAAAACC GGCCTTGGGT AGGTGA
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Protein sequence | MSIWIDNKDR RNVQVQVDGR RLHRILPAGS SARDAKQVEA RLRAELTSAR PLPERAGDPP LAAVMPLYLK HLEHLRSPET ARFHAARITP WLAQYTASEA PKCAAMIIRD MTGAYAPATI NRSLGALKKA LTLAWEQELT PENYGARIKR LPEHNERHIY LTLEQVNELA SHASDPVAAA IWIALFTGCR RGEITKLKAE DVGETTITIR AGNTKTLKTR TVPIIGPMRL WLPFIPLPIN AEGLKSGFRR AREKAGLPHL HFHDLRHSCA SILLASGADL YTISRILGHS STKMTERYAH LQTDAQSIAL ERAFSENALN NALNKKPALG R
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