| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1520 |
|---|
| Symbol | nifK |
|---|
| ID | 7136118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1316743 |
|---|
| End bp | 1318302 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643529908 |
|---|
| Product | nitrogenase molybdenum-iron protein, beta subunit |
|---|
| Protein accession | YP_002425948 |
|---|
| Protein GI | 218665986 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01286] nitrogenase molybdenum-iron protein beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.268449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGA ATGCTGAAAA AGTGCTTGAT CACTTCAATC TGTTCCGTGA ACCGGAATAC
CAGGAGATGT TCAAGAACAA GAAGGCACAA TTTGAAAACC CGGTACCACA GGACAAGCTC
GTGCAGGTTC GTGAATGGAC AAAGACGTGG GATTATCGGG AAAAGAACTT TGCCCGTGAG
GCCTTGACGG TAAATCCCGC CAAGGCCTGC CAACCCCTCG GTGCCGTGTT TGCCGCGGTG
GGTTTTGAGA GCACCTTGCC CTTTGTGCAT GGTTCGCAGG GTTGCGTCGC CTATTATCGC
AGTCATCTGA GTCGGCACTT CAAGGAGCCC ACCTCCTGTG TGTCGTCTTC CATGACCGAG
GATGCCGCCG TATTCGGGGG CCTCAACAAC ATGGTGGACG GACTCGCCAA CGCCTACGCC
ATGTACAAAC CCAAGATGAT TGCCGTTTCC ACCACCTGTA TGGCGGAAGT GATCGGTGAC
GACCTGAACG CCTTCATCAA AACCTCCAAG GAAAAGGGCA GCGTACCAGA AGAATATGAT
GTGCCTTTCG CCCATACTCC GGCCTTCGTC GGCAGCCATG TCACCGGCTA TGACAATGCT
CTGAAGGGTG TACTGGCGCA TTTTTGGGAC GGTAAGGCGG GTACCGTACC AGCACTCGTG
CGCGAACCCA ACGAGAAGAT CAACTTCATT GGCGGTTTTG ACGGTTATAC CGTCGGTAAC
ACCCGGGAAG TGAAGCGCAT CCTGGACCTT ATGAAGCTGG AATATACGAT CCTGGCCGAC
ACCAGCGATG TCTTTGATAC GCCGAGCGAC GGGAAATTCC GCATGTATGA TGGCGGCACC
ACCCTGGAAG ATACGGCGGC AGCCCTGAAT GCCAAGGCCA CTTTCTCCAT GCAGGAATAT
TGCACGGAAA AGACTTTGCC TTTCATTGCA GAGCACGGTC AGGAAGTCGT CGCCCTGAAT
TGCCCCATCG GCGTATCGGG TACGGACAAA TTCCTTATGG AATTGTCCCG CGTCAGCGGC
AAAGCGATTC CCGATGAACT GAAAAAGGAA CGCGGGCGTC TGGTGGATGC CATTGCGGAT
TCCACAGCGC ACATTCATGG CAAAAAGTTC GCCATCTACG GTGATCCGGA TCAGTGCCTC
GGTCTGGCGG CCTTTCTGAT GGAACTGGGC GGCGAACCCA CCCATGTGCT GGCCACCAAT
GGATCCAAGC ATTGGGCGGA GAAAGTGCAG GCATTGTTCG ACAGCTCACC CTTCGGCAAG
GATTGTCATG TCTATGCCGG CAAGGATCTC TGGCATATGC GCAGTCTGCT GTTCACCGAG
CCGGTGGATT TCCTCTTTGG CAATACCTAC GGGAAATATC TCGAACGCGA TACGGGTACG
CCCCTGATCC GTTACGGCTT CCCGATCTTC GATCGCCATC ATCATCACCG TTATCCCATT
TGGGGCTATC AGGGCGGCCT GAATATGCTG GTTCGCATAT TGGACAAGAT TTTTGATGAG
ATCGATAGCA ACAGTAATGT GCCGAGTCAG AGCGATTACA GTTTCGACAT TATTCGTTAA
|
|---|
| Protein sequence | MSQNAEKVLD HFNLFREPEY QEMFKNKKAQ FENPVPQDKL VQVREWTKTW DYREKNFARE
ALTVNPAKAC QPLGAVFAAV GFESTLPFVH GSQGCVAYYR SHLSRHFKEP TSCVSSSMTE
DAAVFGGLNN MVDGLANAYA MYKPKMIAVS TTCMAEVIGD DLNAFIKTSK EKGSVPEEYD
VPFAHTPAFV GSHVTGYDNA LKGVLAHFWD GKAGTVPALV REPNEKINFI GGFDGYTVGN
TREVKRILDL MKLEYTILAD TSDVFDTPSD GKFRMYDGGT TLEDTAAALN AKATFSMQEY
CTEKTLPFIA EHGQEVVALN CPIGVSGTDK FLMELSRVSG KAIPDELKKE RGRLVDAIAD
STAHIHGKKF AIYGDPDQCL GLAAFLMELG GEPTHVLATN GSKHWAEKVQ ALFDSSPFGK
DCHVYAGKDL WHMRSLLFTE PVDFLFGNTY GKYLERDTGT PLIRYGFPIF DRHHHHRYPI
WGYQGGLNML VRILDKIFDE IDSNSNVPSQ SDYSFDIIR
|
|---|
| |